Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CAJPCPJM_137 | 45832 | 46265 | STER_RS05290 | 5.02e-84 | Capsule | Immune modulation | 80.00 | 90.78 | WP_011681172 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CAJPCPJM_3 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_5 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_6 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_7 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_8 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_12 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_14 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_17 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_24 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_26 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_30 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_31 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_34 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_40 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_43 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_44 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_49 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_52 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_55 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_59 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_62 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_64 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_65 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_68 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_74 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_75 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_77 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_78 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_80 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_81 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_82 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_85 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_86 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_87 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_88 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_89 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_90 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_91 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_92 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_94 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_95 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_96 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_98 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_99 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_100 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_101 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_103 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_104 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_105 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_106 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_109 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_110 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_112 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_120 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_121 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_125 | 1.0 | 0.0 | 1.0 |
| CAJPCPJM_133 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_134 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_135 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_137 | 0.0 | 1.0 | 0.0 |
| CAJPCPJM_140 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CAJPCPJM_65 | 51937 | 58432 | False | Unknown | VOG5242, |
Phigaro v2.4.0 (Database: Jan. 2024 release)