Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PNIEANPJ_136 | 1915 | 3834 | tet(O) | ARO:3000190 | tet(O) | 99.37 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PNIEANPJ_136 | 1915 | 3834 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PNIEANPJ_136 | 1915 | 3831 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.84 | 100.00 | WP_012669445.1 |
| PNIEANPJ_56 | 92667 | 92867 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PNIEANPJ_2 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_4 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_5 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_7 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_8 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_10 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_11 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_12 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_15 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_18 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_25 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_27 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_28 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_31 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_36 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_37 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_39 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_40 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_42 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_48 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_52 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_54 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_55 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_56 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_60 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_63 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_64 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_67 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_68 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_72 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_75 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_79 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_82 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_85 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_87 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_88 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_89 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_91 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_100 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_103 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_108 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_113 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_114 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_116 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_118 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_119 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_122 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_125 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_128 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_132 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_133 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_134 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_136 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_138 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_142 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_143 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_146 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_148 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_149 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_150 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_151 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_154 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_156 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_157 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_159 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_160 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_161 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_162 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_163 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_164 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_165 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_166 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_167 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_168 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_169 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_170 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_172 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_176 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_177 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_179 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_180 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_181 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_182 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_183 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_186 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_190 | 1.0 | 0.0 | 1.0 |
| PNIEANPJ_191 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_192 | 0.0 | 1.0 | 0.0 |
| PNIEANPJ_193 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)