Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKDIGLFG_98 | 85591 | 87516 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BKDIGLFG_98 | 85591 | 87516 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKDIGLFG_98 | 85591 | 87513 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BKDIGLFG_1 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_3 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_4 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_6 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_7 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_10 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_11 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_12 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_14 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_16 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_17 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_18 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_20 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_21 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_22 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_26 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_27 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_28 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_29 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_31 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_33 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_34 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_41 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_42 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_43 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_44 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_45 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_46 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_48 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_49 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_51 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_53 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_54 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_59 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_62 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_63 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_64 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_65 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_66 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_69 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_70 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_71 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_72 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_79 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_80 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_82 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_84 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_90 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_91 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_94 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_95 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_96 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_97 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_98 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_99 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_100 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_101 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_106 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_107 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_110 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_113 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_114 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_119 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_121 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_128 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_129 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_131 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_132 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_136 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_138 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_142 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_143 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_144 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_146 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_149 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_151 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_154 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_155 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_158 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_161 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_165 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_166 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_167 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_168 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_171 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_173 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_175 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_176 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_177 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_178 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_181 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_182 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_183 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_184 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_186 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_189 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_192 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_193 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_194 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_195 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_196 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_197 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_199 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_200 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_201 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_202 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_203 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_204 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_205 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_207 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_208 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_209 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_211 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_212 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_213 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_214 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_215 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_216 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_218 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_219 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_220 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_221 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_222 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_223 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_224 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_225 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_226 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_227 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_230 | 1.0 | 0.0 | 1.0 |
| BKDIGLFG_231 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_232 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_234 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_235 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_236 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_237 | 0.0 | 1.0 | 0.0 |
| BKDIGLFG_238 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BKDIGLFG_143 | 75811 | 79259 | False | Unknown | VOG4618, |
| BKDIGLFG_167 | 34821 | 46812 | False | Unknown | VOG0572, |
| BKDIGLFG_232 | 289737 | 300721 | False | Unknown | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)