Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFKDNBMG_51 | 253485 | 254375 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| DFKDNBMG_73 | 135585 | 136550 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DFKDNBMG_73 | 135585 | 136550 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| DFKDNBMG_73 | 135585 | 136550 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| DFKDNBMG_73 | 135585 | 136550 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| DFKDNBMG_73 | 135585 | 136550 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| DFKDNBMG_99 | 7178 | 9093 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.33 | 99.48 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFKDNBMG_51 | 253488 | 254375 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| DFKDNBMG_73 | 135585 | 136547 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DFKDNBMG_1 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_5 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_12 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_14 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_19 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_20 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_25 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_27 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_30 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_39 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_46 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_48 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_51 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_53 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_56 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_58 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_59 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_60 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_61 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_66 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_70 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_73 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_79 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_82 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_84 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_85 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_86 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_87 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_88 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_89 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_90 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_91 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_92 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_93 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_94 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_96 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_97 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_98 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_99 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_100 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_101 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_102 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_103 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_104 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_107 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_108 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_109 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_110 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_111 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_112 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_113 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_114 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_117 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_118 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_120 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_121 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_122 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_123 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_126 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_127 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_128 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_129 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_132 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_133 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_136 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_139 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_142 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_144 | 1.0 | 0.0 | 1.0 |
| DFKDNBMG_145 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_146 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_147 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_148 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_149 | 0.0 | 1.0 | 0.0 |
| DFKDNBMG_157 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DFKDNBMG_104 | 96770 | 101961 | False | Unknown | VOG0159, |
Phigaro v2.4.0 (Database: Jan. 2024 release)