Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEOLMGNE_33 | 35104 | 36006 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JEOLMGNE_33 | 35104 | 36006 | cepA | Unknown Beta-lactam | 99.22 | 100.00 | U05887 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEOLMGNE_33 | 35104 | 36003 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.33 | 100.00 | WP_032579291.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEOLMGNE_4 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_5 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_6 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_8 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_13 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_14 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_16 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_17 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_21 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_22 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_24 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_25 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_27 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_28 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_29 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_30 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_31 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_32 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_33 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_34 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_35 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_36 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_37 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_38 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_39 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_40 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_41 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_42 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_43 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_44 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_45 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_46 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_48 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_49 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_50 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_51 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_52 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_55 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_56 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_57 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_58 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_59 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_60 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_61 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_62 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_64 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_65 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_67 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_68 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_69 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_73 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_74 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_77 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_78 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_79 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_80 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_81 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_83 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_85 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_86 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_88 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_89 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_94 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_95 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_96 | 0.0 | 1.0 | 0.0 |
| JEOLMGNE_97 | 1.0 | 0.0 | 1.0 |
| JEOLMGNE_102 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEOLMGNE_4 | 152349 | 166611 | False | Unknown | VOG0572, |
| JEOLMGNE_68 | 12154 | 24145 | False | Unknown | VOG0572, |
| JEOLMGNE_102 | 78836 | 87895 | False | Unknown | VOG4572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)