Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DOAEBFJL_8 | 10569 | 9868 | WalR | 1.53e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DOAEBFJL_38 | 6447 | 7382 | rep28 | 936 / 936 | 99.57 | CP005948 |
| DOAEBFJL_15 | 33441 | 34541 | repUS73 | 1102 / 1101 | 95.01 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DOAEBFJL_1 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_2 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_3 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_4 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_5 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_6 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_7 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_8 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_9 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_10 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_11 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_12 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_13 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_14 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_15 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_16 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_17 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_18 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_19 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_20 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_21 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_22 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_23 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_24 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_25 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_26 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_27 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_28 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_29 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_30 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_31 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_32 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_33 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_34 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_35 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_36 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_37 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_38 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_39 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_40 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_41 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_42 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_43 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_44 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_45 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_47 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_48 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_49 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_50 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_51 | 0.0 | 1.0 | 0.0 |
| DOAEBFJL_52 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_53 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_54 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_55 | 1.0 | 0.0 | 1.0 |
| DOAEBFJL_56 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DOAEBFJL_1 | 48678 | 83484 | False | Myoviridae | VOG1309, VOG0186, VOG7236, VOG4693, VOG6005, VOG0044, VOG0198, VOG6542, VOG5343, VOG10144, VOG3699, VOG7407, VOG8453, VOG0720, VOG4564, VOG1329, VOG5795, VOG1353, VOG1883, VOG1352, VOG4699, VOG8263, VOG4865, VOG1433, VOG1348, VOG0573, VOG2349, VOG4691, VOG4845, VOG4894 |
| DOAEBFJL_4 | 112836 | 144710 | False | Siphoviridae | VOG1302, VOG0181, VOG0685, VOG0283, VOG0226, VOG0514, VOG8647, VOG0189, VOG1931, VOG0044, VOG5821, VOG0044, VOG0102, VOG0149, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4545, VOG4605, VOG4599, VOG10972 |
| DOAEBFJL_19 | 18887 | 27779 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG0198, VOG8908 |
Phigaro v2.4.0 (Database: Jan. 2024 release)