Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OJHEGFIG_56 | 9846 | 9652 | CspA | 5.94e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OJHEGFIG_50 | 5697 | 6473 | rep30 | 777 / 777 | 99.87 | CP006013 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OJHEGFIG_1 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_2 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_3 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_4 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_5 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_6 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_7 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_8 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_9 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_10 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_11 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_12 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_13 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_14 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_15 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_16 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_17 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_18 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_19 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_20 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_21 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_22 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_23 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_24 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_25 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_26 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_27 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_28 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_29 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_30 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_31 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_32 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_33 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_34 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_35 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_36 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_37 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_38 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_39 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_40 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_41 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_42 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_43 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_44 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_45 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_46 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_47 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_48 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_49 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_50 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_51 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_52 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_53 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_54 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_55 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_56 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_57 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_58 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_59 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_60 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_61 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_62 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_63 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_64 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_65 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_66 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_67 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_68 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_69 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_72 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_73 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_74 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_75 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_76 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_77 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_78 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_79 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_80 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_81 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_82 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_83 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_84 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_85 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_86 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_87 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_88 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_89 | 0.0 | 1.0 | 0.0 |
| OJHEGFIG_90 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_91 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_92 | 1.0 | 0.0 | 1.0 |
| OJHEGFIG_93 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OJHEGFIG_4 | 24201 | 63809 | False | Siphoviridae | VOG5353, VOG4156, VOG0371, VOG5378, VOG0275, VOG2612, VOG9267, VOG9667, VOG4829, VOG2228, VOG0321, VOG4548, VOG10904, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG3307, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0083, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG4626 |
Phigaro v2.4.0 (Database: Jan. 2024 release)