Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IEAAGIAC_7 | 51044 | 52963 | tet(W) | ARO:3000194 | tet(W) | 97.18 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IEAAGIAC_7 | 51044 | 52963 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.11 | 100.00 | FN396364 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IEAAGIAC_7 | 51047 | 52963 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_000691721.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IEAAGIAC_1 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_2 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_3 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_4 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_5 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_6 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_7 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_8 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_9 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_10 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_11 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_12 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_13 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_14 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_15 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_16 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_17 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_18 | 1.0 | 0.0 | 1.0 |
| IEAAGIAC_22 | 1.0 | 0.0 | 1.0 |
| IEAAGIAC_23 | 0.0 | 1.0 | 0.0 |
| IEAAGIAC_24 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IEAAGIAC_6 | 32432 | 63238 | False | Siphoviridae | VOG8294, VOG0703, VOG5087, VOG0861, VOG0648, VOG8224, VOG4599, VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG5413, VOG0198, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG6414, VOG0010, VOG4548, VOG3093 |
| IEAAGIAC_9 | 69538 | 74431 | False | Inoviridae | VOG1866, VOG6430, VOG0013, VOG0831 |
Phigaro v2.4.0 (Database: Jan. 2024 release)