Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FCKOAKHN_224 | 58802 | 59506 | WalR | 4.74e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FCKOAKHN_200 | 406 | 209 | CspR | 5.45e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FCKOAKHN_1 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_2 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_3 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_4 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_5 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_6 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_7 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_8 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_9 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_10 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_11 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_12 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_13 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_14 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_15 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_16 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_17 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_19 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_20 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_21 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_22 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_23 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_24 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_25 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_26 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_29 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_30 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_31 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_32 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_33 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_34 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_35 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_36 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_37 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_38 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_39 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_40 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_41 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_42 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_44 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_45 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_46 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_47 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_48 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_49 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_50 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_51 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_52 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_53 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_64 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_73 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_83 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_94 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_105 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_106 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_117 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_128 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_139 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_150 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_161 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_164 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_165 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_166 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_167 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_168 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_169 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_170 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_171 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_172 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_173 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_174 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_175 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_176 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_177 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_178 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_179 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_180 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_181 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_182 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_183 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_184 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_185 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_186 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_187 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_188 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_189 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_190 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_191 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_192 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_193 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_194 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_195 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_196 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_197 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_198 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_199 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_200 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_201 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_202 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_203 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_204 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_205 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_206 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_207 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_208 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_209 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_210 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_211 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_212 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_213 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_214 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_215 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_216 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_217 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_218 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_219 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_220 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_221 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_222 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_223 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_224 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_225 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_226 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_227 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_228 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_229 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_230 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_231 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_232 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_233 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_234 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_235 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_236 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_237 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_238 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_239 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_240 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_241 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_242 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_243 | 0.0 | 1.0 | 0.0 |
| FCKOAKHN_244 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_245 | 1.0 | 0.0 | 1.0 |
| FCKOAKHN_246 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FCKOAKHN_164 | 599 | 20859 | False | Siphoviridae | VOG6947, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG10303, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG4605, VOG4599, VOG4705 |
| FCKOAKHN_169 | 15392 | 50559 | False | Siphoviridae | VOG7581, VOG6463, VOG0807, VOG0181, VOG10867, VOG4967, VOG3642, VOG0321, VOG0322, VOG4548, VOG6545, VOG4606, VOG0327, VOG9759, VOG0152, VOG3643, VOG5733, VOG0044, VOG0198, VOG4570, VOG3699, VOG10227, VOG0720, VOG4564, VOG5616, VOG1183, VOG4555, VOG0694, VOG1322, VOG4713, VOG1320, VOG9583, VOG1321, VOG0799, VOG0725, VOG1323, VOG0801, VOG4619, VOG4856, VOG0861, VOG7017, VOG0602, VOG4649, VOG4649 |
Phigaro v2.4.0 (Database: Jan. 2024 release)