Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FCPNDCNN_141 | 55615 | 56316 | WalR | 8.79e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FCPNDCNN_113 | 1 | 1040 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
| FCPNDCNN_17 | 30 | 954 | repUS64 | 930 / 954 | 85.38 | JN601038 |
| FCPNDCNN_115 | 1 | 936 | rep28 | 937 / 936 | 81.96 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FCPNDCNN_1 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_2 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_3 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_4 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_5 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_6 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_8 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_9 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_10 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_11 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_12 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_13 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_14 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_15 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_16 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_17 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_18 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_19 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_20 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_21 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_22 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_23 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_24 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_25 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_26 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_27 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_29 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_30 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_31 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_32 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_33 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_34 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_35 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_36 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_37 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_38 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_39 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_40 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_41 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_42 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_43 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_44 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_46 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_57 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_68 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_79 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_84 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_85 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_86 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_87 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_88 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_89 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_90 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_91 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_92 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_93 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_94 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_95 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_96 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_97 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_98 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_99 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_100 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_101 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_102 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_103 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_104 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_105 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_106 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_107 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_108 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_109 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_110 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_111 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_112 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_113 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_114 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_115 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_116 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_117 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_118 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_119 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_120 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_121 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_122 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_123 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_124 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_125 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_126 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_127 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_128 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_129 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_130 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_131 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_132 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_133 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_134 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_135 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_136 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_137 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_138 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_139 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_140 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_141 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_142 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_143 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_144 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_145 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_146 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_147 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_148 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_149 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_150 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_151 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_152 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_153 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_154 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_155 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_156 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_157 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_158 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_159 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_160 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_161 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_162 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_163 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_164 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_165 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_166 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_167 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_168 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_169 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_170 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_171 | 0.0 | 1.0 | 0.0 |
| FCPNDCNN_172 | 1.0 | 0.0 | 1.0 |
| FCPNDCNN_173 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FCPNDCNN_1 | 113423 | 125455 | False | Siphoviridae | VOG0480, VOG0198, VOG0204, VOG4553, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205 |
| FCPNDCNN_57 | 2902 | 34967 | False | Myoviridae | VOG0703, VOG4705, VOG4783, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4910, VOG1026, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198, VOG0149, VOG0044, VOG6515, VOG4567, VOG0052, VOG0189, VOG8647, VOG0514, VOG0226 |
| FCPNDCNN_89 | 24839 | 37038 | False | Siphoviridae | VOG3685, VOG6914, VOG4602, VOG6495, VOG9667, VOG0707, VOG5616, VOG0787, VOG5353, VOG0650, VOG1309, VOG0186, VOG7236, VOG4693, VOG6005, VOG0044 |
Phigaro v2.4.0 (Database: Jan. 2024 release)