Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BPEGLDCE_1 | 152295 | 151591 | WalR | 1.35e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| BPEGLDCE_13 | 34959 | 35153 | CspR | 4.42e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| BPEGLDCE_13 | 34959 | 35156 | CspA | 6.77e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BPEGLDCE_135 | 375 | 1310 | rep28 | 936 / 936 | 100.00 | CP005948 |
| BPEGLDCE_116 | 7688 | 8727 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BPEGLDCE_1 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_2 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_3 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_4 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_5 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_6 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_7 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_9 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_10 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_11 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_12 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_13 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_14 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_15 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_16 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_17 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_18 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_19 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_20 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_21 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_22 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_23 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_24 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_25 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_35 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_46 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_57 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_68 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_79 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_90 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_97 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_98 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_99 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_100 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_101 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_102 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_103 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_104 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_105 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_106 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_107 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_108 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_109 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_110 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_111 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_112 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_113 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_114 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_115 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_116 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_117 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_118 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_119 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_120 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_121 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_122 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_123 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_124 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_125 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_126 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_127 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_128 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_129 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_130 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_131 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_132 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_133 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_134 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_135 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_136 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_137 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_138 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_139 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_140 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_141 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_142 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_143 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_144 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_145 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_146 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_147 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_148 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_149 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_150 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_151 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_152 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_153 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_154 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_155 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_156 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_157 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_158 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_159 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_160 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_161 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_162 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_163 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_164 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_166 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_167 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_168 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_169 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_170 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_171 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_172 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_173 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_174 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_175 | 0.0 | 1.0 | 0.0 |
| BPEGLDCE_176 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_177 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_178 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_179 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_180 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_181 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_182 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_183 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_184 | 1.0 | 0.0 | 1.0 |
| BPEGLDCE_185 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BPEGLDCE_102 | 8815 | 19020 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG6414, VOG4609, VOG4632 |
Phigaro v2.4.0 (Database: Jan. 2024 release)