Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ICFMKBEB_3 | 87400 | 87206 | CspA | 1.49e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ICFMKBEB_78 | 632 | 892 | IncFII | 261 / 261 | 99.62 | AY458016 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ICFMKBEB_1 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_2 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_3 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_4 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_5 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_6 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_7 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_8 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_9 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_10 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_11 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_12 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_13 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_14 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_15 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_16 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_17 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_18 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_19 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_20 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_21 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_22 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_23 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_24 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_25 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_26 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_27 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_28 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_29 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_30 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_31 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_32 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_33 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_34 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_35 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_36 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_37 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_38 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_39 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_40 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_41 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_42 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_43 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_44 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_45 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_46 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_47 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_48 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_49 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_50 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_51 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_52 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_53 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_54 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_55 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_56 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_57 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_58 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_60 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_61 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_62 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_63 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_64 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_65 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_66 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_68 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_69 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_70 | 0.0 | 1.0 | 0.0 |
| ICFMKBEB_71 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_72 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_73 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_74 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_75 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_76 | 1.0 | 0.0 | 1.0 |
| ICFMKBEB_77 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ICFMKBEB_1 | 118457 | 147199 | False | Siphoviridae | VOG0198, VOG0686, VOG0689, VOG9503, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG4713, VOG1330, VOG1900, VOG0704, VOG4634, VOG1333, VOG1334, VOG6163, VOG1335, VOG10608, VOG9888, VOG0648, VOG0641 |
| ICFMKBEB_2 | 44512 | 72508 | False | Siphoviridae | VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG0083, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841, VOG0195, VOG0866, VOG0686, VOG8453, VOG0198, VOG4039, VOG4693 |
| ICFMKBEB_3 | 4737 | 10474 | True | Siphoviridae | VOG4553, VOG0204, VOG4589, VOG0641, VOG9409, VOG0221, VOG0221 |
Phigaro v2.4.0 (Database: Jan. 2024 release)