Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BCAPEMIB_77 | 145254 | 145991 | ErmB | ARO:3000375 | ErmB | 98.78 | 98.79 | AF242872.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BCAPEMIB_77 | 145254 | 145991 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | U18931 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BCAPEMIB_77 | 145257 | 145991 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | EXACTX | 100.00 | 100.00 | WP_002292226.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BCAPEMIB_1 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_2 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_4 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_7 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_12 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_16 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_20 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_25 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_31 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_35 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_39 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_41 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_45 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_48 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_49 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_51 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_54 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_56 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_58 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_60 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_64 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_68 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_74 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_76 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_77 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_78 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_79 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_80 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_82 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_84 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_85 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_86 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_87 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_89 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_91 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_92 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_94 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_95 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_96 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_98 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_100 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_101 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_103 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_104 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_105 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_106 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_107 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_108 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_109 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_110 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_111 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_112 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_113 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_114 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_116 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_117 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_118 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_119 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_120 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_122 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_123 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_124 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_125 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_126 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_127 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_129 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_130 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_134 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_135 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_136 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_137 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_140 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_143 | 0.0 | 1.0 | 0.0 |
| BCAPEMIB_144 | 1.0 | 0.0 | 1.0 |
| BCAPEMIB_145 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BCAPEMIB_1 | 415888 | 423426 | False | Siphoviridae | VOG0025, |
| BCAPEMIB_77 | 142336 | 152167 | False | Siphoviridae | VOG0090, |
| BCAPEMIB_105 | 79565 | 103397 | True | Unknown | VOG9234, |
Phigaro v2.4.0 (Database: Jan. 2024 release)