Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NOJKIOJL_98 | 39933 | 41858 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NOJKIOJL_98 | 39933 | 41858 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| NOJKIOJL_99 | 38315 | 39265 | cfxA4 | Unknown Beta-lactam | 86.12 | 98.34 | AY769933 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NOJKIOJL_98 | 39933 | 41855 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| NOJKIOJL_99 | 38313 | 39266 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | BLASTX | 83.65 | 99.07 | WP_057280848.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NOJKIOJL_1 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_2 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_3 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_4 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_5 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_6 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_7 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_8 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_9 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_10 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_11 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_12 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_13 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_14 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_15 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_16 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_17 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_18 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_19 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_20 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_21 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_22 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_23 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_24 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_25 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_26 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_27 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_28 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_29 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_30 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_32 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_33 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_35 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_36 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_37 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_38 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_39 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_40 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_41 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_42 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_43 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_44 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_54 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_65 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_76 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_86 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_93 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_95 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_96 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_97 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_98 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_99 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_100 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_101 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_102 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_103 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_104 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_105 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_106 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_107 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_108 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_109 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_110 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_111 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_112 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_113 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_114 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_115 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_116 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_117 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_118 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_119 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_120 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_121 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_122 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_123 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_124 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_125 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_126 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_127 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_128 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_129 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_130 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_131 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_132 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_133 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_134 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_135 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_136 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_137 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_138 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_139 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_140 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_141 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_142 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_143 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_144 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_145 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_146 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_147 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_148 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_149 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_150 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_151 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_152 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_153 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_154 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_155 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_156 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_157 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_158 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_159 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_160 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_161 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_162 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_163 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_164 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_165 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_166 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_167 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_168 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_169 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_170 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_171 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_172 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_173 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_174 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_175 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_176 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_177 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_178 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_179 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_180 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_181 | 1.0 | 0.0 | 1.0 |
| NOJKIOJL_182 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_183 | 0.0 | 1.0 | 0.0 |
| NOJKIOJL_184 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NOJKIOJL_97 | 85049 | 98225 | False | Unknown | VOG3992, |
| NOJKIOJL_125 | 8021 | 14998 | False | Siphoviridae | VOG4589, |
| NOJKIOJL_162 | 126167 | 135363 | False | Unknown | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)