Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IILMLJAJ_92 | 73250 | 75224 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IILMLJAJ_92 | 73298 | 75223 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| IILMLJAJ_133 | 93250 | 94467 | mef(A) | Erythromycin, Azithromycin | 94.99 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IILMLJAJ_92 | 73298 | 75220 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| IILMLJAJ_133 | 93247 | 94467 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IILMLJAJ_1 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_2 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_3 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_4 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_5 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_6 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_7 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_8 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_9 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_10 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_11 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_12 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_13 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_14 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_20 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_29 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_38 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_49 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_60 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_69 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_76 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_85 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_92 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_93 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_97 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_98 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_102 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_108 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_114 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_116 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_118 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_119 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_120 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_121 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_122 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_123 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_124 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_125 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_126 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_127 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_128 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_129 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_130 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_131 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_132 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_133 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_134 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_135 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_136 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_137 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_138 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_139 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_140 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_141 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_142 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_143 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_144 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_145 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_146 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_147 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_148 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_149 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_150 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_151 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_152 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_153 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_154 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_155 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_156 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_157 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_158 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_159 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_160 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_161 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_162 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_163 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_164 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_165 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_166 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_167 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_168 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_169 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_170 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_171 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_172 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_173 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_174 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_175 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_176 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_177 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_178 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_179 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_180 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_181 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_182 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_183 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_184 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_185 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_186 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_187 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_188 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_189 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_190 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_191 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_192 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_193 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_194 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_195 | 1.0 | 0.0 | 1.0 |
| IILMLJAJ_196 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_197 | 0.0 | 1.0 | 0.0 |
| IILMLJAJ_198 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)