Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 0 | 7.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FEJMLJCO_62 | 437998 | 439203 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| FEJMLJCO_96 | 27922 | 29847 | tet(Q) | ARO:3000191 | tet(Q) | 89.39 | 97.56 | Z21523.1 |
| FEJMLJCO_102 | 12949 | 14874 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FEJMLJCO_102 | 12949 | 14874 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| FEJMLJCO_62 | 577619 | 578165 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 98.90 | 74.42 | M15332 |
| FEJMLJCO_58 | 1024 | 2487 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| FEJMLJCO_58 | 2613 | 3827 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FEJMLJCO_62 | 437464 | 437973 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| FEJMLJCO_102 | 12949 | 14871 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| FEJMLJCO_62 | 438001 | 439203 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| FEJMLJCO_62 | 577622 | 578164 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | PARTIALX | 98.90 | 74.18 | WP_063844791.1 |
| FEJMLJCO_58 | 1027 | 2487 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| FEJMLJCO_58 | 2604 | 3827 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
| FEJMLJCO_96 | 27925 | 29847 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.86 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FEJMLJCO_146 | 661 | 1340 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FEJMLJCO_1 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_2 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_3 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_4 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_6 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_7 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_8 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_9 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_10 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_11 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_12 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_13 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_14 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_15 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_16 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_17 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_18 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_22 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_31 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_39 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_48 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_53 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_58 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_59 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_60 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_61 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_62 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_63 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_64 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_65 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_66 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_67 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_68 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_69 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_70 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_71 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_72 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_73 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_74 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_75 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_76 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_77 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_78 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_79 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_80 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_81 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_82 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_83 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_84 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_85 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_86 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_87 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_88 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_89 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_90 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_91 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_92 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_93 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_94 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_95 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_96 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_97 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_98 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_99 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_100 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_101 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_102 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_103 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_104 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_105 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_106 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_107 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_108 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_109 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_110 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_111 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_112 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_113 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_114 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_115 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_116 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_117 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_118 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_119 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_120 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_121 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_122 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_123 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_124 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_125 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_126 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_127 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_128 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_129 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_130 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_131 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_132 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_133 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_134 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_135 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_136 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_137 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_138 | 0.0 | 1.0 | 0.0 |
| FEJMLJCO_139 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_140 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_141 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_142 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_143 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_144 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_146 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_147 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_148 | 1.0 | 0.0 | 1.0 |
| FEJMLJCO_149 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FEJMLJCO_39 | 49755 | 53046 | False | Myoviridae | VOG5380, |
Phigaro v2.4.0 (Database: Jan. 2024 release)