Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JHOADNBA_126 | 38733 | 39872 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| JHOADNBA_126 | 37398 | 38534 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| JHOADNBA_126 | 36359 | 37222 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| JHOADNBA_160 | 13252 | 14052 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| JHOADNBA_157 | 4409 | 5143 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JHOADNBA_160 | 13252 | 14052 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| JHOADNBA_157 | 4409 | 5143 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | M15332 |
| JHOADNBA_126 | 37398 | 38564 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| JHOADNBA_106 | 65892 | 67109 | mef(A) | Erythromycin, Azithromycin | 94.99 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JHOADNBA_126 | 36362 | 37222 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| JHOADNBA_126 | 37401 | 38564 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| JHOADNBA_126 | 38736 | 39872 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| JHOADNBA_160 | 13255 | 14052 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| JHOADNBA_157 | 4409 | 5140 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_014387027.1 |
| JHOADNBA_106 | 65892 | 67112 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JHOADNBA_1 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_2 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_3 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_4 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_5 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_6 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_7 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_8 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_9 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_10 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_11 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_12 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_13 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_14 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_15 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_16 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_18 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_19 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_20 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_21 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_22 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_23 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_24 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_25 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_27 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_28 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_29 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_30 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_31 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_32 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_33 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_34 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_35 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_46 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_57 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_68 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_79 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_84 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_85 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_86 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_87 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_88 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_89 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_90 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_91 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_92 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_93 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_94 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_95 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_96 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_97 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_98 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_99 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_100 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_101 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_102 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_103 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_104 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_105 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_106 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_107 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_108 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_109 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_110 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_111 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_112 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_113 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_114 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_115 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_116 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_117 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_118 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_119 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_120 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_121 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_122 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_123 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_124 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_125 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_126 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_127 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_128 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_129 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_130 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_131 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_132 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_133 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_134 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_135 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_136 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_137 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_138 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_139 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_140 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_141 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_142 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_143 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_144 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_145 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_146 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_147 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_148 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_149 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_150 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_151 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_152 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_153 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_154 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_155 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_156 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_157 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_158 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_159 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_160 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_161 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_162 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_163 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_164 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_165 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_166 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_167 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_168 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_169 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_170 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_171 | 1.0 | 0.0 | 1.0 |
| JHOADNBA_172 | 0.0 | 1.0 | 0.0 |
| JHOADNBA_173 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JHOADNBA_13 | 52276 | 58127 | False | Myoviridae | VOG0982, |
| JHOADNBA_130 | 99278 | 107694 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)