Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 0 | 7.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFFEPFKP_135 | 38733 | 39872 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| BFFEPFKP_135 | 37398 | 38534 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| BFFEPFKP_135 | 36359 | 37222 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| BFFEPFKP_165 | 11920 | 12654 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| BFFEPFKP_166 | 175 | 975 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BFFEPFKP_166 | 175 | 975 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| BFFEPFKP_165 | 11920 | 12654 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | M15332 |
| BFFEPFKP_135 | 37398 | 38564 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| BFFEPFKP_113 | 235 | 1452 | mef(A) | Erythromycin, Azithromycin | 94.99 | 100.00 | AF227520 |
| BFFEPFKP_116 | 23772 | 24722 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| BFFEPFKP_116 | 23772 | 24722 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| BFFEPFKP_116 | 23772 | 24722 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| BFFEPFKP_116 | 23772 | 24722 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFFEPFKP_135 | 36362 | 37222 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| BFFEPFKP_135 | 37401 | 38564 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| BFFEPFKP_135 | 38736 | 39872 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| BFFEPFKP_166 | 175 | 972 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| BFFEPFKP_165 | 11923 | 12654 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_014387027.1 |
| BFFEPFKP_113 | 232 | 1452 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
| BFFEPFKP_116 | 23771 | 24724 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BFFEPFKP_1 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_2 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_3 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_4 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_5 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_6 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_7 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_8 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_9 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_10 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_11 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_12 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_13 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_14 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_15 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_16 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_17 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_18 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_19 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_20 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_21 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_23 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_24 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_25 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_26 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_27 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_28 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_30 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_31 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_32 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_33 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_34 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_35 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_36 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_37 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_38 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_39 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_40 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_41 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_42 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_46 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_57 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_68 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_79 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_88 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_89 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_90 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_91 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_92 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_93 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_94 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_95 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_96 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_97 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_98 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_99 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_100 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_101 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_102 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_103 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_104 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_105 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_106 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_107 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_108 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_109 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_110 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_111 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_112 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_113 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_114 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_115 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_116 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_117 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_118 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_119 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_120 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_121 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_122 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_123 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_124 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_125 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_126 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_127 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_128 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_129 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_130 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_131 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_132 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_133 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_134 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_135 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_136 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_137 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_138 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_139 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_140 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_141 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_142 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_143 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_144 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_145 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_146 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_147 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_148 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_149 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_150 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_151 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_152 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_153 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_154 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_155 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_156 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_157 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_158 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_159 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_160 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_161 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_162 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_163 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_164 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_165 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_166 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_167 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_168 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_169 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_170 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_171 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_172 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_173 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_174 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_175 | 0.0 | 1.0 | 0.0 |
| BFFEPFKP_176 | 1.0 | 0.0 | 1.0 |
| BFFEPFKP_177 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BFFEPFKP_13 | 52276 | 58127 | False | Myoviridae | VOG0982, |
Phigaro v2.4.0 (Database: Jan. 2024 release)