Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NOEPNLEE_96 | 57806 | 59731 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| NOEPNLEE_94 | 29695 | 30900 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NOEPNLEE_96 | 57806 | 59731 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NOEPNLEE_94 | 30925 | 31434 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| NOEPNLEE_96 | 57806 | 59728 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| NOEPNLEE_94 | 29695 | 30897 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NOEPNLEE_8 | 1022 | 1602 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NOEPNLEE_1 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_2 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_3 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_4 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_5 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_6 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_7 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_8 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_9 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_10 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_11 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_12 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_13 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_14 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_15 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_16 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_17 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_18 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_19 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_20 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_21 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_22 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_23 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_24 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_25 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_35 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_46 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_57 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_68 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_73 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_74 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_75 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_76 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_77 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_78 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_79 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_80 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_81 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_82 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_83 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_84 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_85 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_86 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_87 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_88 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_89 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_90 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_91 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_92 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_93 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_94 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_95 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_96 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_97 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_98 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_99 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_100 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_101 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_102 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_103 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_104 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_105 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_106 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_107 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_108 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_109 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_110 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_111 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_112 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_113 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_114 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_115 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_116 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_117 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_118 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_119 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_120 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_121 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_122 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_123 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_124 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_125 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_126 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_127 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_128 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_129 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_130 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_131 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_132 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_133 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_134 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_135 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_136 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_137 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_138 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_139 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_140 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_141 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_142 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_143 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_144 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_145 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_146 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_147 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_148 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_149 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_150 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_151 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_152 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_153 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_154 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_155 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_156 | 0.0 | 1.0 | 0.0 |
| NOEPNLEE_157 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_158 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_159 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_160 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_161 | 1.0 | 0.0 | 1.0 |
| NOEPNLEE_162 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)