Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CDKBKILF_97 | 44539 | 43835 | WalR | 5.41e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| CDKBKILF_50 | 35041 | 35235 | CspR | 5.33e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| CDKBKILF_50 | 35041 | 35238 | CspA | 8.18e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| CDKBKILF_78 | 16015 | 17115 | repUS73 | 1101 / 1101 | 95.46 | CP002654 |
| CDKBKILF_8 | 167 | 1120 | repUS64 | 958 / 954 | 87.47 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CDKBKILF_1 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_2 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_3 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_5 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_6 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_7 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_8 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_9 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_10 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_11 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_13 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_15 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_17 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_18 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_19 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_20 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_21 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_24 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_35 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_48 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_49 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_50 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_51 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_52 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_53 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_54 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_55 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_56 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_57 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_58 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_59 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_60 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_61 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_62 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_63 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_64 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_65 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_66 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_67 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_68 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_69 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_70 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_71 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_72 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_73 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_74 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_75 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_76 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_77 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_78 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_79 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_80 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_81 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_82 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_83 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_84 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_85 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_86 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_87 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_88 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_89 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_90 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_91 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_92 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_93 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_94 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_95 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_97 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_99 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_100 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_101 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_102 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_103 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_104 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_105 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_106 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_107 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_108 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_109 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_110 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_111 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_112 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_113 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_114 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_115 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_117 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_119 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_120 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_121 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_122 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_123 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_124 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_125 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_126 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_127 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_128 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_129 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_130 | 0.0 | 1.0 | 0.0 |
| CDKBKILF_131 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_133 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_134 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_135 | 1.0 | 0.0 | 1.0 |
| CDKBKILF_136 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CDKBKILF_1 | 93824 | 104547 | False | Siphoviridae | VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG6414, VOG4609, VOG4632 |
| CDKBKILF_59 | 2031 | 17500 | False | Siphoviridae | VOG0695, VOG0696, VOG0697, VOG6548, VOG9763, VOG0701, VOG6307, VOG0801, VOG4619, VOG4619, VOG4856, VOG9640, VOG0804, VOG7896 |
| CDKBKILF_81 | 2257 | 23264 | False | Siphoviridae | VOG8870, VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG8239, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886 |
Phigaro v2.4.0 (Database: Jan. 2024 release)