Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HLMHPNGB_1 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_2 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_3 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_4 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_5 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_6 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_7 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_8 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_9 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_10 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_11 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_12 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_13 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_14 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_15 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_16 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_17 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_18 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_19 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_20 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_21 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_22 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_23 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_24 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_25 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_26 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_27 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_28 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_29 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_30 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_31 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_32 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_33 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_34 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_35 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_36 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_37 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_38 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_39 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_40 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_41 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_42 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_43 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_44 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_45 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_46 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_47 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_48 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_49 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_50 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_51 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_52 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_53 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_54 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_55 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_56 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_57 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_58 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_59 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_60 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_61 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_62 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_63 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_64 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_65 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_66 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_67 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_68 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_69 | 1.0 | 0.0 | 1.0 |
| HLMHPNGB_78 | 0.0 | 1.0 | 0.0 |
| HLMHPNGB_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HLMHPNGB_4 | 48463 | 52453 | False | Unknown | VOG1792, |
| HLMHPNGB_12 | 89013 | 98626 | False | Unknown | VOG4573, |
| HLMHPNGB_19 | 54285 | 62238 | False | Siphoviridae | VOG4581, |
| HLMHPNGB_34 | 414208 | 418599 | False | Siphoviridae | VOG2406, |
Phigaro v2.4.0 (Database: Jan. 2024 release)