Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BHPAMJMP_23 | 6734 | 7219 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BHPAMJMP_23 | 6734 | 7219 | lnu(A) | Lincomycin | 98.77 | 100.00 | M14039 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BHPAMJMP_23 | 6737 | 7219 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BHPAMJMP_1 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_2 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_3 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_4 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_5 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_6 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_7 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_8 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_9 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_10 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_11 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_12 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_13 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_14 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_15 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_16 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_17 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_18 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_19 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_20 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_21 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_22 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_23 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_24 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_25 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_26 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_27 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_28 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_29 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_30 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_31 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_32 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_33 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_34 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_35 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_36 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_37 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_38 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_39 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_40 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_41 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_42 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_43 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_44 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_45 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_46 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_48 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_49 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_50 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_51 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_52 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_53 | 1.0 | 0.0 | 1.0 |
| BHPAMJMP_54 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_55 | 0.0 | 1.0 | 0.0 |
| BHPAMJMP_56 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BHPAMJMP_2 | 742 | 24724 | False | Siphoviridae | VOG5008, VOG7906, VOG6163, VOG4633, VOG4598, VOG0800, VOG1333, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG10914, VOG7533, VOG4564, VOG0720, VOG10227, VOG0796, VOG8453, VOG0198 |
| BHPAMJMP_2 | 26651 | 33207 | False | Myoviridae | VOG9667, VOG4566, VOG0283, VOG0685, VOG4995, VOG11077, VOG6658, VOG0507, VOG4552, VOG8520, VOG8520 |
Phigaro v2.4.0 (Database: Jan. 2024 release)