Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NMAMOPIN_48 | 2903 | 4828 | tet(Q) | ARO:3000191 | tet(Q) | 96.88 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NMAMOPIN_48 | 2903 | 4828 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.70 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NMAMOPIN_48 | 2906 | 4828 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.91 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NMAMOPIN_1 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_2 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_3 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_4 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_5 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_6 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_7 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_8 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_9 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_10 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_11 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_12 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_13 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_14 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_15 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_16 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_17 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_18 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_19 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_20 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_21 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_22 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_23 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_24 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_25 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_26 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_27 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_28 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_29 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_30 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_31 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_32 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_33 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_34 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_35 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_36 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_37 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_38 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_39 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_40 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_41 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_42 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_43 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_44 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_45 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_46 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_47 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_48 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_49 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_50 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_51 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_52 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_53 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_54 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_55 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_56 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_57 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_58 | 1.0 | 0.0 | 1.0 |
| NMAMOPIN_59 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_60 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_61 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_62 | 0.0 | 1.0 | 0.0 |
| NMAMOPIN_63 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)