Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KMFBCEDI_50 | 6460 | 7911 | ErmF | ARO:3000498 | ErmF | 99.62 | 181.58 | M17124.1 |
| KMFBCEDI_50 | 5081 | 6247 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| KMFBCEDI_37 | 3288 | 5234 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 98.63 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KMFBCEDI_50 | 6460 | 7260 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| KMFBCEDI_50 | 5081 | 6247 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| KMFBCEDI_37 | 3288 | 5200 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KMFBCEDI_50 | 6463 | 7260 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| KMFBCEDI_50 | 5081 | 6244 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| KMFBCEDI_37 | 3288 | 5201 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.37 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KMFBCEDI_1 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_2 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_3 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_4 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_5 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_6 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_7 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_8 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_9 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_10 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_11 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_12 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_13 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_14 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_15 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_16 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_17 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_18 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_19 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_20 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_21 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_22 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_23 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_24 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_25 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_26 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_27 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_28 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_29 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_30 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_31 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_32 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_33 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_34 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_35 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_36 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_37 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_38 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_39 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_40 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_41 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_42 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_43 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_44 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_45 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_46 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_47 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_48 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_49 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_50 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_51 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_52 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_53 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_54 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_55 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_56 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_57 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_58 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_59 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_60 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_61 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_62 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_63 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_64 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_65 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_66 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_67 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_68 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_69 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_70 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_71 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_72 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_73 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_74 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_75 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_76 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_77 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_78 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_79 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_80 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_81 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_82 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_83 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_84 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_85 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_86 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_87 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_88 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_89 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_90 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_91 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_92 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_93 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_94 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_95 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_96 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_97 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_98 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_101 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_104 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_105 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_106 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_107 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_108 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_109 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_110 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_111 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_112 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_113 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_114 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_115 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_116 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_117 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_118 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_119 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_120 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_121 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_122 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_123 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_124 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_125 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_126 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_127 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_128 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_129 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_130 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_131 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_132 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_133 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_134 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_135 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_136 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_137 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_138 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_139 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_140 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_141 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_142 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_143 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_144 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_145 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_146 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_147 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_148 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_149 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_150 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_151 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_152 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_153 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_154 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_155 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_156 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_157 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_158 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_159 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_160 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_161 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_162 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_163 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_164 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_165 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_166 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_167 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_168 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_169 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_170 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_171 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_172 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_173 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_174 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_175 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_176 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_177 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_178 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_179 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_180 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_181 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_182 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_183 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_184 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_185 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_186 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_187 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_188 | 1.0 | 0.0 | 1.0 |
| KMFBCEDI_189 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_190 | 0.0 | 1.0 | 0.0 |
| KMFBCEDI_191 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KMFBCEDI_126 | 99608 | 104880 | False | Siphoviridae | VOG9541, |
| KMFBCEDI_137 | 108599 | 118003 | False | Siphoviridae | VOG0299, |
Phigaro v2.4.0 (Database: Jan. 2024 release)