Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 0 | 6.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GLKMFJHA_131 | 123121 | 124029 | aad(6) | ARO:3002628 | aad(6) | 100.00 | 109.42 | AY712687.1 |
| GLKMFJHA_131 | 122582 | 123112 | SAT-4 | ARO:3002897 | SAT-4 | 99.43 | 97.78 | U01945.1 |
| GLKMFJHA_131 | 120436 | 121231 | APH(3')-IIIa | ARO:3002647 | APH(3')-IIIa | 100.00 | 98.86 | CP004067.1 |
| GLKMFJHA_135 | 13391 | 14206 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
| GLKMFJHA_135 | 8789 | 10763 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GLKMFJHA_131 | 123121 | 124029 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | AF330699 |
| GLKMFJHA_131 | 120436 | 121230 | aph(3')-III | Kanamycin, Amikacin, Neomycin, Butirosin, Isepamicin, Lividomycin, Paromomycin, Ribostamycin | 100.00 | 100.00 | M26832 |
| GLKMFJHA_135 | 13391 | 14206 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| GLKMFJHA_135 | 8789 | 10714 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| GLKMFJHA_131 | 125660 | 126877 | mef(A) | Erythromycin, Azithromycin | 95.07 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GLKMFJHA_131 | 123124 | 124029 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_001255866.1 |
| GLKMFJHA_131 | 120439 | 121230 | aph(3')-IIIa | aminoglycoside O-phosphotransferase APH(3')-IIIa | EXACTX | 100.00 | 100.00 | WP_001096887.1 |
| GLKMFJHA_131 | 122585 | 123124 | sat4 | streptothricin N-acetyltransferase Sat4 | EXACTX | 100.00 | 100.00 | WP_000627290.1 |
| GLKMFJHA_135 | 13394 | 14206 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| GLKMFJHA_135 | 8792 | 10714 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| GLKMFJHA_131 | 125663 | 126877 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.77 | 99.26 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GLKMFJHA_1 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_2 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_3 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_4 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_5 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_6 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_7 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_8 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_9 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_10 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_11 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_12 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_13 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_14 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_15 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_16 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_17 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_19 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_20 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_21 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_22 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_23 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_24 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_25 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_26 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_27 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_28 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_29 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_30 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_31 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_32 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_37 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_44 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_50 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_52 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_53 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_54 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_55 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_56 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_57 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_58 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_59 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_60 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_61 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_62 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_63 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_64 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_65 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_66 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_67 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_68 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_69 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_70 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_71 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_72 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_73 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_74 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_75 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_76 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_77 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_78 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_79 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_80 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_81 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_82 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_83 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_84 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_85 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_86 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_87 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_88 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_89 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_90 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_91 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_92 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_93 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_94 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_95 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_96 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_97 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_98 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_99 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_100 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_101 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_102 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_103 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_104 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_105 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_106 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_107 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_108 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_109 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_110 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_111 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_112 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_113 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_114 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_115 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_116 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_117 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_118 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_119 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_120 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_121 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_122 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_123 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_124 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_125 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_126 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_127 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_128 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_129 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_130 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_131 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_132 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_133 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_134 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_135 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_136 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_137 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_138 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_139 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_140 | 0.0 | 1.0 | 0.0 |
| GLKMFJHA_141 | 1.0 | 0.0 | 1.0 |
| GLKMFJHA_142 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)