Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OFJGPCNF_24 | 97858 | 98823 | CfxA2 | ARO:3003002 | CfxA2 | 99.38 | 100.00 | AF118110.1 |
| OFJGPCNF_53 | 14587 | 16560 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OFJGPCNF_53 | 14635 | 16560 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| OFJGPCNF_24 | 97858 | 98823 | cfxA3 | Ampicillin | 99.69 | 100.00 | AF472622 |
| OFJGPCNF_24 | 97858 | 98823 | cfxA4 | Unknown Beta-lactam | 99.69 | 100.00 | AY769933 |
| OFJGPCNF_24 | 97858 | 98823 | cfxA5 | Unknown Beta-lactam | 99.69 | 100.00 | AY769934 |
| OFJGPCNF_24 | 97858 | 98823 | cfxA | Cefoxitin, Ampicillin | 99.69 | 100.00 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OFJGPCNF_53 | 14635 | 16557 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| OFJGPCNF_24 | 97861 | 98823 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.38 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OFJGPCNF_9 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_12 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_13 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_14 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_16 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_17 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_18 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_19 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_20 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_21 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_22 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_23 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_24 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_25 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_26 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_27 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_28 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_29 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_30 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_31 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_32 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_33 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_34 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_35 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_36 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_37 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_38 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_39 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_40 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_41 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_42 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_43 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_44 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_45 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_46 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_47 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_48 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_49 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_50 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_51 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_52 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_53 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_54 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_55 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_56 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_57 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_58 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_59 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_60 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_61 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_63 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_64 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_65 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_66 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_67 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_68 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_69 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_70 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_71 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_72 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_73 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_74 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_75 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_76 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_77 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_78 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_79 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_80 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_81 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_82 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_83 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_84 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_85 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_86 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_87 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_88 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_89 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_90 | 1.0 | 0.0 | 1.0 |
| OFJGPCNF_91 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_96 | 0.0 | 1.0 | 0.0 |
| OFJGPCNF_106 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)