Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PDDFDHOE_144 | 1185 | 3110 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PDDFDHOE_144 | 1185 | 3110 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PDDFDHOE_144 | 1188 | 3110 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PDDFDHOE_1 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_2 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_3 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_4 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_5 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_6 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_7 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_8 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_9 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_10 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_11 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_12 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_13 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_14 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_15 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_16 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_17 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_18 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_19 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_20 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_21 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_22 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_23 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_24 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_25 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_26 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_27 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_28 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_29 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_30 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_31 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_32 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_33 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_34 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_35 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_36 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_37 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_38 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_39 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_41 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_42 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_43 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_44 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_45 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_46 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_47 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_48 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_49 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_50 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_51 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_52 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_53 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_54 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_55 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_56 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_57 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_58 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_59 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_60 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_61 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_62 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_63 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_64 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_65 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_66 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_67 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_68 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_69 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_70 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_71 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_72 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_73 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_74 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_75 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_77 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_78 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_81 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_82 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_83 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_84 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_85 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_86 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_87 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_88 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_89 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_90 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_91 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_92 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_93 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_94 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_95 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_96 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_97 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_98 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_99 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_100 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_101 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_102 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_103 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_104 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_105 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_106 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_107 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_108 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_109 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_110 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_111 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_112 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_113 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_114 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_115 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_116 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_117 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_118 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_119 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_120 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_121 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_122 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_123 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_124 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_125 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_126 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_127 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_128 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_129 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_130 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_131 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_132 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_133 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_134 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_135 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_136 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_137 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_138 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_139 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_140 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_141 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_142 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_143 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_144 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_145 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_146 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_147 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_148 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_149 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_150 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_151 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_152 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_153 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_154 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_155 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_156 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_157 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_158 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_159 | 1.0 | 0.0 | 1.0 |
| PDDFDHOE_160 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_161 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_162 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_163 | 0.0 | 1.0 | 0.0 |
| PDDFDHOE_164 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PDDFDHOE_89 | 47038 | 55454 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)