Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AALDNLHJ_123 | 21581 | 21778 | CspR | 3.12e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| AALDNLHJ_123 | 21581 | 21778 | CspA | 5.82e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AALDNLHJ_270 | 7265 | 7807 | rep38 | 543 / 903 | 86.00 | CP005943 |
| AALDNLHJ_83 | 38235 | 39170 | rep28 | 944 / 936 | 81.57 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AALDNLHJ_1 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_2 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_3 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_4 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_5 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_6 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_7 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_8 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_10 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_11 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_12 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_13 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_14 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_15 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_16 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_17 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_18 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_19 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_20 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_21 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_22 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_23 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_24 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_25 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_28 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_29 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_30 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_31 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_32 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_33 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_34 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_36 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_43 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_54 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_65 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_76 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_83 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_91 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_100 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_101 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_105 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_109 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_118 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_123 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_131 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_135 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_137 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_144 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_152 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_163 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_164 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_171 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_180 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_188 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_192 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_198 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_207 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_216 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_226 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_235 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_243 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_244 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_255 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_266 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_269 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_270 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_271 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_272 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_273 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_274 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_275 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_276 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_277 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_278 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_279 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_280 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_281 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_282 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_283 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_284 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_285 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_286 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_287 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_288 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_289 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_290 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_291 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_292 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_293 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_294 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_295 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_296 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_297 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_298 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_299 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_300 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_301 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_302 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_303 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_304 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_305 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_306 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_307 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_308 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_309 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_310 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_311 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_312 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_313 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_314 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_315 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_316 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_317 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_318 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_319 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_320 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_321 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_322 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_324 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_325 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_326 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_327 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_328 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_329 | 0.0 | 1.0 | 0.0 |
| AALDNLHJ_330 | 1.0 | 0.0 | 1.0 |
| AALDNLHJ_331 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AALDNLHJ_277 | 3145 | 30938 | False | Siphoviridae | VOG9880, VOG4856, VOG9997, VOG10972, VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG3349 |
| AALDNLHJ_277 | 37053 | 47864 | False | Myoviridae / Siphoviridae | VOG1298, VOG0638, VOG0425, VOG4813, VOG4693, VOG4237, VOG8685, VOG0189, VOG8647, VOG0514, VOG0226, VOG0186, VOG1309 |
| AALDNLHJ_299 | 23585 | 43364 | False | Myoviridae / Siphoviridae | VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295, VOG1176, VOG10457 |
Phigaro v2.4.0 (Database: Jan. 2024 release)