Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ANHLFKPJ_12 | 47397 | 48095 | vanR gene in vanD cluster | ARO:3002923 | vanR_in_vanD_cl | 91.81 | 100.00 | AY082011.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ANHLFKPJ_12 | 47397 | 48092 | vanR-D | vancomycin resistance response regulator transcription factor VanR-D | BLASTX | 96.55 | 100.00 | WP_063856722.1 |
| ANHLFKPJ_12 | 48085 | 49227 | vanS-D | vancomycin resistance histidine kinase VanS-D | BLASTX | 91.08 | 100.00 | WP_063856744.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ANHLFKPJ_1 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_2 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_3 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_4 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_5 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_6 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_7 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_8 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_9 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_10 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_11 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_12 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_13 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_14 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_15 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_16 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_17 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_18 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_19 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_20 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_21 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_22 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_23 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_24 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_25 | 1.0 | 0.0 | 1.0 |
| ANHLFKPJ_26 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_27 | 1.0 | 0.0 | 1.0 |
| ANHLFKPJ_28 | 1.0 | 0.0 | 1.0 |
| ANHLFKPJ_29 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_30 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_31 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_33 | 1.0 | 0.0 | 1.0 |
| ANHLFKPJ_34 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_35 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_36 | 1.0 | 0.0 | 1.0 |
| ANHLFKPJ_37 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_38 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_45 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_56 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_67 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_70 | 0.0 | 1.0 | 0.0 |
| ANHLFKPJ_71 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ANHLFKPJ_23 | 7205 | 19811 | False | Siphoviridae | VOG1183, |
| ANHLFKPJ_24 | 5408 | 9708 | False | Siphoviridae | VOG0692, |
| ANHLFKPJ_71 | 246815 | 256468 | False | Siphoviridae | VOG0701, |
Phigaro v2.4.0 (Database: Jan. 2024 release)