Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AOOLEKCK_85 | 55467 | 56171 | WalR | 4.70e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| AOOLEKCK_138 | 226 | 420 | CspR | 3.91e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| AOOLEKCK_138 | 226 | 423 | CspA | 6.00e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AOOLEKCK_83 | 1262 | 2191 | rep28 | 930 / 930 | 98.82 | CP003162 |
| AOOLEKCK_116 | 1467 | 2567 | repUS73 | 1101 / 1101 | 95.10 | CP002654 |
| AOOLEKCK_148 | 9128 | 9756 | rep38 | 630 / 903 | 87.94 | CP005943 |
| AOOLEKCK_124 | 296 | 794 | repUS54 | 500 / 690 | 84.80 | EU185047 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AOOLEKCK_1 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_2 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_3 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_4 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_5 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_6 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_7 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_9 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_10 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_12 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_13 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_14 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_16 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_17 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_18 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_19 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_20 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_21 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_24 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_25 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_26 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_27 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_28 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_29 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_30 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_31 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_33 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_34 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_35 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_43 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_46 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_48 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_50 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_57 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_58 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_67 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_69 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_70 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_71 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_73 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_74 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_75 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_76 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_77 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_78 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_79 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_80 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_81 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_82 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_83 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_84 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_85 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_86 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_87 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_88 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_89 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_90 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_91 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_92 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_93 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_95 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_96 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_97 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_98 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_99 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_100 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_103 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_104 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_105 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_106 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_107 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_108 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_109 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_110 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_111 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_112 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_113 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_114 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_115 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_116 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_117 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_119 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_120 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_121 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_122 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_124 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_125 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_127 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_128 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_129 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_130 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_131 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_133 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_134 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_135 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_136 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_138 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_140 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_141 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_142 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_143 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_144 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_145 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_147 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_148 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_149 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_150 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_154 | 0.0 | 1.0 | 0.0 |
| AOOLEKCK_155 | 1.0 | 0.0 | 1.0 |
| AOOLEKCK_157 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AOOLEKCK_92 | 1038 | 30928 | False | Siphoviridae | VOG0602, VOG1637, VOG8917, VOG9997, VOG3498, VOG4763, VOG4619, VOG0801, VOG6163, VOG0541, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG4673, VOG3643, VOG0586, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321 |
| AOOLEKCK_99 | 879 | 26423 | False | Siphoviridae | VOG8870, VOG10957, VOG4599, VOG4605, VOG4545, VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG4010, VOG3643, VOG0044, VOG10015, VOG3480 |
| AOOLEKCK_100 | 3659 | 22305 | False | Siphoviridae | VOG4619, VOG0801, VOG6163, VOG0701, VOG8357, VOG6548, VOG0697, VOG0696, VOG0695, VOG4711, VOG9317, VOG0692, VOG0691, VOG3699 |
| AOOLEKCK_150 | 33961 | 53082 | False | Siphoviridae | VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG4711, VOG4713, VOG1320, VOG5660, VOG1321, VOG0799, VOG0725, VOG1323, VOG0801, VOG4619, VOG4856, VOG8917 |
Phigaro v2.4.0 (Database: Jan. 2024 release)