Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMNPLGOC_99 | 36181 | 37386 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| AMNPLGOC_137 | 3801 | 5726 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AMNPLGOC_137 | 3801 | 5726 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AMNPLGOC_99 | 35647 | 36156 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| AMNPLGOC_137 | 3804 | 5726 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| AMNPLGOC_99 | 36184 | 37386 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AMNPLGOC_4 | 95 | 675 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AMNPLGOC_1 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_2 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_3 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_4 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_5 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_6 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_7 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_8 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_9 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_10 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_11 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_12 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_13 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_14 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_15 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_16 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_17 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_18 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_19 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_20 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_21 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_23 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_24 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_25 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_26 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_27 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_35 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_46 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_57 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_68 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_77 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_78 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_79 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_80 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_81 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_82 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_83 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_84 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_85 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_86 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_87 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_88 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_89 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_90 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_91 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_92 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_93 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_94 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_95 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_96 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_97 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_98 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_99 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_100 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_101 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_102 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_103 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_104 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_105 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_106 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_107 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_108 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_109 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_110 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_111 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_112 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_113 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_114 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_115 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_116 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_117 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_118 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_119 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_120 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_121 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_122 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_123 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_124 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_125 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_126 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_127 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_128 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_129 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_130 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_131 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_132 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_133 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_134 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_135 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_136 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_137 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_138 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_139 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_140 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_141 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_142 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_143 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_144 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_145 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_146 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_147 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_148 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_149 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_150 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_151 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_152 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_153 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_154 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_155 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_156 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_157 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_158 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_159 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_160 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_161 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_162 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_163 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_164 | 1.0 | 0.0 | 1.0 |
| AMNPLGOC_166 | 0.0 | 1.0 | 0.0 |
| AMNPLGOC_167 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)