Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LENGFLOP_101 | 48374 | 49174 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
| LENGFLOP_101 | 47347 | 48171 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
| LENGFLOP_232 | 15810 | 17783 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LENGFLOP_101 | 47347 | 48171 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| LENGFLOP_232 | 15858 | 17783 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| LENGFLOP_101 | 48374 | 49174 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LENGFLOP_101 | 47347 | 48168 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| LENGFLOP_232 | 15858 | 17780 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| LENGFLOP_101 | 48377 | 49174 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| LENGFLOP_89 | 413 | 993 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LENGFLOP_1 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_2 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_3 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_4 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_5 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_6 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_7 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_8 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_9 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_10 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_11 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_12 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_13 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_14 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_15 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_16 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_17 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_18 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_19 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_20 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_21 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_22 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_23 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_24 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_25 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_26 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_27 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_28 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_29 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_30 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_31 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_32 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_33 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_34 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_35 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_36 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_37 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_38 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_39 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_40 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_41 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_42 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_43 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_44 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_45 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_46 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_47 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_48 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_49 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_50 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_52 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_53 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_54 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_55 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_56 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_57 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_58 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_59 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_60 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_61 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_62 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_63 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_64 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_65 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_66 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_67 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_68 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_69 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_70 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_71 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_72 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_73 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_74 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_75 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_76 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_77 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_78 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_79 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_80 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_81 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_82 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_83 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_84 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_85 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_86 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_87 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_88 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_90 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_101 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_112 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_113 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_124 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_135 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_146 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_157 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_168 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_179 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_182 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_183 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_184 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_185 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_186 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_187 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_188 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_189 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_190 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_191 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_192 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_193 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_194 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_195 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_196 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_197 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_198 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_199 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_200 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_201 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_202 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_203 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_204 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_205 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_206 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_207 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_208 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_209 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_210 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_211 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_212 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_213 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_214 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_215 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_216 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_217 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_218 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_219 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_220 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_221 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_222 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_223 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_224 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_225 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_226 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_227 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_228 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_229 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_230 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_231 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_232 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_233 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_234 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_235 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_236 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_237 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_238 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_239 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_240 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_241 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_242 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_243 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_244 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_245 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_246 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_247 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_248 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_249 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_250 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_251 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_252 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_253 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_254 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_255 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_256 | 1.0 | 0.0 | 1.0 |
| LENGFLOP_257 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_258 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_259 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_260 | 0.0 | 1.0 | 0.0 |
| LENGFLOP_261 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LENGFLOP_57 | 29054 | 33006 | False | Unknown | VOG8909, |
| LENGFLOP_146 | 9737 | 17922 | False | Unknown | VOG4573, |
| LENGFLOP_182 | 39715 | 51812 | False | Siphoviridae | VOG0749, |
| LENGFLOP_251 | 110828 | 115093 | False | Unknown | VOG0094, |
| LENGFLOP_255 | 3210 | 10906 | False | Unknown | VOG5023, |
Phigaro v2.4.0 (Database: Jan. 2024 release)