Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBMNPKLC_174 | 29673 | 30878 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| IBMNPKLC_182 | 21070 | 22995 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IBMNPKLC_182 | 21070 | 22995 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IBMNPKLC_174 | 30903 | 31412 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| IBMNPKLC_182 | 21070 | 22992 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| IBMNPKLC_174 | 29673 | 30875 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IBMNPKLC_26 | 408 | 988 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBMNPKLC_1 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_2 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_3 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_4 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_5 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_6 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_7 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_8 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_9 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_10 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_11 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_12 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_13 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_14 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_15 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_16 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_17 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_18 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_19 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_20 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_21 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_22 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_23 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_24 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_25 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_26 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_35 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_46 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_57 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_68 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_79 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_90 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_101 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_112 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_113 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_124 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_129 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_130 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_131 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_132 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_133 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_134 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_135 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_136 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_137 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_138 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_139 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_140 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_141 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_142 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_143 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_144 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_145 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_146 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_147 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_148 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_149 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_150 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_151 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_152 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_153 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_154 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_155 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_156 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_157 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_158 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_159 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_160 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_161 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_162 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_163 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_164 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_165 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_166 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_167 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_168 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_169 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_170 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_171 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_172 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_173 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_174 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_175 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_176 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_177 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_178 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_179 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_180 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_181 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_182 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_183 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_184 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_185 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_186 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_187 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_188 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_189 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_190 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_191 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_192 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_193 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_194 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_195 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_196 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_197 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_198 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_199 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_200 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_201 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_202 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_203 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_204 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_205 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_207 | 0.0 | 1.0 | 0.0 |
| IBMNPKLC_208 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_209 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_210 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_211 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_212 | 1.0 | 0.0 | 1.0 |
| IBMNPKLC_213 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)