Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NLCHDLJF_103 | 29673 | 30878 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| NLCHDLJF_104 | 3801 | 5726 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NLCHDLJF_104 | 3801 | 5726 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NLCHDLJF_103 | 30903 | 31412 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| NLCHDLJF_104 | 3804 | 5726 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| NLCHDLJF_103 | 29673 | 30875 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NLCHDLJF_25 | 39 | 619 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NLCHDLJF_1 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_2 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_3 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_4 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_5 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_7 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_8 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_9 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_10 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_11 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_12 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_13 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_14 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_15 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_16 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_17 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_18 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_19 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_20 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_21 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_22 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_23 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_24 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_25 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_35 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_46 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_57 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_68 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_79 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_82 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_83 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_84 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_85 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_86 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_87 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_88 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_89 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_90 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_91 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_92 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_93 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_94 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_95 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_96 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_97 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_98 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_99 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_100 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_101 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_102 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_103 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_104 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_105 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_106 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_107 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_108 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_109 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_110 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_111 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_112 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_113 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_114 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_115 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_116 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_117 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_118 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_119 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_120 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_121 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_122 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_123 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_124 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_125 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_126 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_127 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_128 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_129 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_130 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_131 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_132 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_133 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_134 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_135 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_136 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_137 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_138 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_139 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_140 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_141 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_142 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_143 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_144 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_145 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_146 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_147 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_148 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_149 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_150 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_151 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_152 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_153 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_154 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_155 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_156 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_157 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_158 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_159 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_160 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_161 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_162 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_163 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_164 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_165 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_166 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_167 | 0.0 | 1.0 | 0.0 |
| NLCHDLJF_168 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_170 | 1.0 | 0.0 | 1.0 |
| NLCHDLJF_171 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)