Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HGONDGJO_76 | 34536 | 34057 | smpB | 7.13e-91 | trans-translation is a bacterial translational control system that directs the modification and degradation of proteins, | 85.00 | 100.00 | ABJ02039 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HGONDGJO_1 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_2 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_3 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_4 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_5 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_6 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_7 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_8 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_9 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_10 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_11 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_12 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_13 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_14 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_15 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_16 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_17 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_18 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_19 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_20 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_21 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_22 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_23 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_24 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_25 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_26 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_27 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_28 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_29 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_30 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_31 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_32 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_33 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_34 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_35 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_36 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_37 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_38 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_39 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_40 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_41 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_42 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_43 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_44 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_45 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_46 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_47 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_48 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_49 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_50 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_51 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_52 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_53 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_54 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_55 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_56 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_57 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_58 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_59 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_60 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_61 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_62 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_63 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_64 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_65 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_66 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_67 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_68 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_69 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_70 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_71 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_72 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_73 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_74 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_75 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_76 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_77 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_78 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_79 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_80 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_81 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_82 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_83 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_84 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_85 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_86 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_87 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_88 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_89 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_90 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_91 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_92 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_93 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_94 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_95 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_96 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_97 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_98 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_99 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_100 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_101 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_102 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_103 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_104 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_105 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_106 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_107 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_108 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_109 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_110 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_111 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_112 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_113 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_114 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_115 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_116 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_117 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_118 | 1.0 | 0.0 | 1.0 |
| HGONDGJO_119 | 0.0 | 1.0 | 0.0 |
| HGONDGJO_120 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HGONDGJO_13 | 43917 | 76620 | False | Siphoviridae | VOG2215, |
Phigaro v2.4.0 (Database: Jan. 2024 release)