Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| INALAMBA_139 | 27078 | 26884 | CspA | 9.21e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| INALAMBA_2 | 0.0 | 1.0 | 0.0 |
| INALAMBA_3 | 0.0 | 1.0 | 0.0 |
| INALAMBA_4 | 0.0 | 1.0 | 0.0 |
| INALAMBA_5 | 1.0 | 0.0 | 1.0 |
| INALAMBA_6 | 0.0 | 1.0 | 0.0 |
| INALAMBA_7 | 0.0 | 1.0 | 0.0 |
| INALAMBA_8 | 0.0 | 1.0 | 0.0 |
| INALAMBA_9 | 0.0 | 1.0 | 0.0 |
| INALAMBA_10 | 0.0 | 1.0 | 0.0 |
| INALAMBA_11 | 0.0 | 1.0 | 0.0 |
| INALAMBA_12 | 0.0 | 1.0 | 0.0 |
| INALAMBA_14 | 0.0 | 1.0 | 0.0 |
| INALAMBA_15 | 0.0 | 1.0 | 0.0 |
| INALAMBA_16 | 0.0 | 1.0 | 0.0 |
| INALAMBA_17 | 0.0 | 1.0 | 0.0 |
| INALAMBA_18 | 0.0 | 1.0 | 0.0 |
| INALAMBA_19 | 0.0 | 1.0 | 0.0 |
| INALAMBA_20 | 0.0 | 1.0 | 0.0 |
| INALAMBA_21 | 0.0 | 1.0 | 0.0 |
| INALAMBA_22 | 0.0 | 1.0 | 0.0 |
| INALAMBA_23 | 0.0 | 1.0 | 0.0 |
| INALAMBA_25 | 0.0 | 1.0 | 0.0 |
| INALAMBA_26 | 1.0 | 0.0 | 1.0 |
| INALAMBA_27 | 0.0 | 1.0 | 0.0 |
| INALAMBA_28 | 1.0 | 0.0 | 1.0 |
| INALAMBA_29 | 0.0 | 1.0 | 0.0 |
| INALAMBA_30 | 0.0 | 1.0 | 0.0 |
| INALAMBA_31 | 0.0 | 1.0 | 0.0 |
| INALAMBA_32 | 0.0 | 1.0 | 0.0 |
| INALAMBA_33 | 0.0 | 1.0 | 0.0 |
| INALAMBA_34 | 1.0 | 0.0 | 1.0 |
| INALAMBA_35 | 0.0 | 1.0 | 0.0 |
| INALAMBA_36 | 0.0 | 1.0 | 0.0 |
| INALAMBA_37 | 0.0 | 1.0 | 0.0 |
| INALAMBA_38 | 1.0 | 0.0 | 1.0 |
| INALAMBA_39 | 0.0 | 1.0 | 0.0 |
| INALAMBA_40 | 0.0 | 1.0 | 0.0 |
| INALAMBA_41 | 0.0 | 1.0 | 0.0 |
| INALAMBA_42 | 0.0 | 1.0 | 0.0 |
| INALAMBA_43 | 0.0 | 1.0 | 0.0 |
| INALAMBA_44 | 0.0 | 1.0 | 0.0 |
| INALAMBA_45 | 0.0 | 1.0 | 0.0 |
| INALAMBA_47 | 1.0 | 0.0 | 1.0 |
| INALAMBA_48 | 0.0 | 1.0 | 0.0 |
| INALAMBA_49 | 0.0 | 1.0 | 0.0 |
| INALAMBA_50 | 0.0 | 1.0 | 0.0 |
| INALAMBA_51 | 0.0 | 1.0 | 0.0 |
| INALAMBA_52 | 0.0 | 1.0 | 0.0 |
| INALAMBA_56 | 0.0 | 1.0 | 0.0 |
| INALAMBA_57 | 0.0 | 1.0 | 0.0 |
| INALAMBA_58 | 0.0 | 1.0 | 0.0 |
| INALAMBA_59 | 0.0 | 1.0 | 0.0 |
| INALAMBA_66 | 0.0 | 1.0 | 0.0 |
| INALAMBA_72 | 0.0 | 1.0 | 0.0 |
| INALAMBA_73 | 0.0 | 1.0 | 0.0 |
| INALAMBA_74 | 0.0 | 1.0 | 0.0 |
| INALAMBA_82 | 0.0 | 1.0 | 0.0 |
| INALAMBA_85 | 0.0 | 1.0 | 0.0 |
| INALAMBA_89 | 1.0 | 0.0 | 1.0 |
| INALAMBA_90 | 1.0 | 0.0 | 1.0 |
| INALAMBA_91 | 0.0 | 1.0 | 0.0 |
| INALAMBA_106 | 1.0 | 0.0 | 1.0 |
| INALAMBA_107 | 0.0 | 1.0 | 0.0 |
| INALAMBA_110 | 0.0 | 1.0 | 0.0 |
| INALAMBA_121 | 1.0 | 0.0 | 1.0 |
| INALAMBA_123 | 1.0 | 0.0 | 1.0 |
| INALAMBA_124 | 0.0 | 1.0 | 0.0 |
| INALAMBA_125 | 0.0 | 1.0 | 0.0 |
| INALAMBA_133 | 0.0 | 1.0 | 0.0 |
| INALAMBA_135 | 0.0 | 1.0 | 0.0 |
| INALAMBA_136 | 0.0 | 1.0 | 0.0 |
| INALAMBA_137 | 0.0 | 1.0 | 0.0 |
| INALAMBA_138 | 0.0 | 1.0 | 0.0 |
| INALAMBA_139 | 0.0 | 1.0 | 0.0 |
| INALAMBA_140 | 0.0 | 1.0 | 0.0 |
| INALAMBA_141 | 0.0 | 1.0 | 0.0 |
| INALAMBA_142 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| INALAMBA_21 | 7226 | 24392 | False | Siphoviridae | VOG5932, VOG4619, VOG0801, VOG0701, VOG0698, VOG0697, VOG0696, VOG0695, VOG4555, VOG0692, VOG0691 |
| INALAMBA_40 | 4358 | 32411 | False | Siphoviridae | VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG3307, VOG0713, VOG3307, VOG0198, VOG8256, VOG0796, VOG4544, VOG0720, VOG4564, VOG7533, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG6163, VOG10593, VOG8917 |
Phigaro v2.4.0 (Database: Jan. 2024 release)