Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FNBFMMKD_113 | 49520 | 49326 | CspA | 2.07e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FNBFMMKD_2 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_3 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_4 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_5 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_6 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_7 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_8 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_9 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_10 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_11 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_12 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_14 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_15 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_16 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_17 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_18 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_19 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_20 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_21 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_22 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_23 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_25 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_26 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_27 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_28 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_30 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_31 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_36 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_50 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_59 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_65 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_75 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_76 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_77 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_95 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_99 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_111 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_112 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_113 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_114 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_115 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_117 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_118 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_119 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_120 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_121 | 1.0 | 0.0 | 1.0 |
| FNBFMMKD_122 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_123 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_124 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_125 | 0.0 | 1.0 | 0.0 |
| FNBFMMKD_126 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FNBFMMKD_26 | 62806 | 72206 | False | Myoviridae | VOG5235, VOG0083, VOG0382, VOG0384, VOG10104, VOG0226 |
| FNBFMMKD_30 | 61526 | 95849 | False | Myoviridae | VOG6298, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4711, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG4972, VOG0198, VOG4693, VOG5341, VOG1183, VOG0713, VOG3307, VOG1298, VOG9671, VOG9507, VOG0189, VOG4566, VOG0226, VOG0514, VOG0283, VOG0535 |
Phigaro v2.4.0 (Database: Jan. 2024 release)