Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HFFKCMKK_86 | 7661 | 7467 | CspA | 7.05e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HFFKCMKK_2 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_3 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_4 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_5 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_6 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_12 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_14 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_15 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_19 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_20 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_28 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_29 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_30 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_37 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_38 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_39 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_40 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_41 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_43 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_44 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_45 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_47 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_48 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_49 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_50 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_51 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_52 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_53 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_54 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_55 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_56 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_57 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_58 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_59 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_60 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_61 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_62 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_63 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_64 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_65 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_66 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_67 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_68 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_69 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_70 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_71 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_72 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_73 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_74 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_75 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_76 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_77 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_78 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_79 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_80 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_81 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_82 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_83 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_84 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_85 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_86 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_87 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_88 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_89 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_90 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_91 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_92 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_93 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_97 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_98 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_107 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_108 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_114 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_115 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_116 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_118 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_119 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_120 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_121 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_131 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_146 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_147 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_148 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_149 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_157 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_158 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_159 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_160 | 1.0 | 0.0 | 1.0 |
| HFFKCMKK_161 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_162 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_163 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_164 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_169 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_170 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_171 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_172 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_177 | 0.0 | 1.0 | 0.0 |
| HFFKCMKK_178 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HFFKCMKK_81 | 13609 | 26283 | False | Siphoviridae | VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0204, VOG0198, VOG4714 |
| HFFKCMKK_148 | 1591 | 31128 | False | Siphoviridae | VOG8294, VOG0641, VOG0648, VOG9888, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG6542, VOG9503, VOG0689, VOG8945, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)