Probiotic potential risk score


ARGs VFs PGs PPRS
1011.41

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
ADJFMDNB_669052824tet(W)ARO:3000194tet(W)96.71100.00AJ222769.3

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
ADJFMDNB_669052824tet(W)Doxycycline, Tetracycline, Minocycline98.96100.00FN396364

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
ADJFMDNB_669082824tet(W)tetracycline resistance ribosomal protection protein Tet(W)BLASTX99.53100.00WP_000691721.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
ADJFMDNB_2644608946283CspA6.84e-28cold shock protein83.0898.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
ADJFMDNB_450.01.00.0
ADJFMDNB_661.00.01.0
ADJFMDNB_1620.01.00.0
ADJFMDNB_1860.01.00.0
ADJFMDNB_2290.01.00.0
ADJFMDNB_2300.01.00.0
ADJFMDNB_2310.01.00.0
ADJFMDNB_2320.01.00.0
ADJFMDNB_2330.01.00.0
ADJFMDNB_2340.01.00.0
ADJFMDNB_2361.00.01.0
ADJFMDNB_2371.00.01.0
ADJFMDNB_2380.01.00.0
ADJFMDNB_2390.01.00.0
ADJFMDNB_2401.00.01.0
ADJFMDNB_2410.01.00.0
ADJFMDNB_2420.01.00.0
ADJFMDNB_2430.01.00.0
ADJFMDNB_2440.01.00.0
ADJFMDNB_2450.01.00.0
ADJFMDNB_2470.01.00.0
ADJFMDNB_2480.01.00.0
ADJFMDNB_2490.01.00.0
ADJFMDNB_2500.01.00.0
ADJFMDNB_2511.00.01.0
ADJFMDNB_2520.01.00.0
ADJFMDNB_2530.01.00.0
ADJFMDNB_2541.00.01.0
ADJFMDNB_2550.01.00.0
ADJFMDNB_2560.01.00.0
ADJFMDNB_2580.01.00.0
ADJFMDNB_2590.01.00.0
ADJFMDNB_2600.01.00.0
ADJFMDNB_2610.01.00.0
ADJFMDNB_2620.01.00.0
ADJFMDNB_2630.01.00.0
ADJFMDNB_2640.01.00.0
ADJFMDNB_2650.01.00.0
ADJFMDNB_2660.01.00.0
ADJFMDNB_2671.00.01.0
ADJFMDNB_2690.01.00.0
ADJFMDNB_2700.01.00.0
ADJFMDNB_2710.01.00.0
ADJFMDNB_2720.01.00.0
ADJFMDNB_2730.01.00.0
ADJFMDNB_2740.01.00.0
ADJFMDNB_2750.01.00.0
ADJFMDNB_2760.01.00.0
ADJFMDNB_2770.01.00.0
ADJFMDNB_2780.01.00.0
ADJFMDNB_2800.01.00.0
ADJFMDNB_2810.01.00.0
ADJFMDNB_2820.01.00.0
ADJFMDNB_2830.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
ADJFMDNB_2331147636525FalseSiphoviridaeVOG0641, VOG0648, VOG7145, VOG10608, VOG1335, VOG6163, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG1345, VOG9503, VOG0689

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements