Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JLJOANCA_138 | 20103 | 19909 | CspA | 1.35e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JLJOANCA_136 | 2595 | 3625 | repUS67 | 1031 / 1039 | 95.44 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JLJOANCA_4 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_11 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_12 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_18 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_26 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_30 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_31 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_32 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_39 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_49 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_50 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_60 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_66 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_67 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_69 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_70 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_71 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_72 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_73 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_74 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_75 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_76 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_77 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_78 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_80 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_81 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_82 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_83 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_84 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_85 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_86 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_87 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_88 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_89 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_91 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_92 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_93 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_94 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_95 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_96 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_97 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_98 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_99 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_100 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_102 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_103 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_104 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_105 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_106 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_107 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_108 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_109 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_110 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_111 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_113 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_114 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_115 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_116 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_117 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_118 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_119 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_121 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_122 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_123 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_124 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_125 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_126 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_127 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_128 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_129 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_130 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_131 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_132 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_133 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_134 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_135 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_136 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_137 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_138 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_139 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_140 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_141 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_142 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_143 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_151 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_153 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_154 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_155 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_157 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_158 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_159 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_175 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_176 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_184 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_192 | 1.0 | 0.0 | 1.0 |
| JLJOANCA_193 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_208 | 0.0 | 1.0 | 0.0 |
| JLJOANCA_209 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JLJOANCA_92 | 50511 | 55517 | False | Siphoviridae | VOG7188, VOG0275, VOG11077, VOG0901, VOG4552 |
Phigaro v2.4.0 (Database: Jan. 2024 release)