Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MBLHPKCM_124 | 6742 | 6548 | CspA | 7.02e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MBLHPKCM_2 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_3 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_4 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_5 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_6 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_7 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_8 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_9 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_10 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_11 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_12 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_14 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_15 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_16 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_17 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_18 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_19 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_20 | 1.0 | 0.0 | 1.0 |
| MBLHPKCM_22 | 1.0 | 0.0 | 1.0 |
| MBLHPKCM_23 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_25 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_26 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_27 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_28 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_29 | 1.0 | 0.0 | 1.0 |
| MBLHPKCM_49 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_54 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_61 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_73 | 1.0 | 0.0 | 1.0 |
| MBLHPKCM_85 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_109 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_110 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_111 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_112 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_113 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_115 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_116 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_117 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_118 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_119 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_120 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_121 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_122 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_123 | 0.0 | 1.0 | 0.0 |
| MBLHPKCM_124 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MBLHPKCM_15 | 7750 | 33792 | False | Siphoviridae | VOG0686, VOG7111, VOG0198, VOG0866, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163, VOG0801, VOG3462, VOG4405, VOG4856, VOG4334, VOG4705, VOG4868, VOG0609 |
| MBLHPKCM_27 | 5803 | 36714 | False | Siphoviridae | VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG8916, VOG1183, VOG7043, VOG3307, VOG0198, VOG0796, VOG10227, VOG0720, VOG4564, VOG5697, VOG7533, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG0727, VOG4599, VOG5007, VOG0648, VOG0641 |
Phigaro v2.4.0 (Database: Jan. 2024 release)