Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KGFKBCPM_169 | 7661 | 7467 | CspA | 7.05e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KGFKBCPM_5 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_6 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_22 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_23 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_25 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_41 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_43 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_44 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_54 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_55 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_56 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_57 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_58 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_59 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_70 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_71 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_72 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_73 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_83 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_87 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_88 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_89 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_91 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_100 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_114 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_123 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_126 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_127 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_128 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_129 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_131 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_132 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_133 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_134 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_136 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_137 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_138 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_139 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_140 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_141 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_142 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_143 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_144 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_145 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_147 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_148 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_149 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_150 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_151 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_152 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_153 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_154 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_155 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_156 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_158 | 1.0 | 0.0 | 1.0 |
| KGFKBCPM_159 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_160 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_161 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_162 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_163 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_164 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_165 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_166 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_167 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_169 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_170 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_171 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_172 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_173 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_174 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_175 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_176 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_177 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_178 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_182 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_184 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_185 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_186 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_187 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_197 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_212 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_213 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_214 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_222 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_233 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_243 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_245 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_246 | 0.0 | 1.0 | 0.0 |
| KGFKBCPM_252 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KGFKBCPM_141 | 24028 | 36702 | False | Siphoviridae | VOG4714, VOG0198, VOG0204, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632 |
| KGFKBCPM_151 | 63304 | 92841 | False | Siphoviridae | VOG6140, VOG0198, VOG8945, VOG0689, VOG9503, VOG6542, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG4713, VOG1330, VOG1900, VOG0704, VOG4634, VOG1333, VOG1334, VOG4545, VOG1335, VOG10608, VOG9888, VOG0648, VOG0641 |
Phigaro v2.4.0 (Database: Jan. 2024 release)