Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BMEJHBAK_166 | 7661 | 7467 | CspA | 7.05e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BMEJHBAK_15 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_16 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_17 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_28 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_29 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_35 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_38 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_40 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_43 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_44 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_45 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_46 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_59 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_60 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_61 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_62 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_70 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_74 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_76 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_77 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_78 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_89 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_91 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_92 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_99 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_102 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_103 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_104 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_118 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_130 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_131 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_132 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_133 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_134 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_136 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_137 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_138 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_139 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_140 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_141 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_142 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_143 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_144 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_145 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_146 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_147 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_148 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_149 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_150 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_151 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_152 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_153 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_154 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_155 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_156 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_158 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_159 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_161 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_162 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_163 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_164 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_165 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_166 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_167 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_169 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_170 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_171 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_172 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_173 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_174 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_175 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_176 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_177 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_178 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_180 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_181 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_182 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_190 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_191 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_202 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_203 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_204 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_229 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_231 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_232 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_242 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_243 | 1.0 | 0.0 | 1.0 |
| BMEJHBAK_251 | 0.0 | 1.0 | 0.0 |
| BMEJHBAK_260 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BMEJHBAK_151 | 2145 | 31682 | False | Siphoviridae | VOG8294, VOG0641, VOG0648, VOG9888, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG6542, VOG9503, VOG0689, VOG8945, VOG0198 |
| BMEJHBAK_163 | 24038 | 36712 | False | Siphoviridae | VOG4714, VOG0198, VOG0204, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632 |
Phigaro v2.4.0 (Database: Jan. 2024 release)