Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LELEELNC_185 | 15875 | 16069 | CspA | 3.19e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LELEELNC_7 | 0.0 | 1.0 | 0.0 |
| LELEELNC_21 | 0.0 | 1.0 | 0.0 |
| LELEELNC_22 | 0.0 | 1.0 | 0.0 |
| LELEELNC_23 | 0.0 | 1.0 | 0.0 |
| LELEELNC_38 | 0.0 | 1.0 | 0.0 |
| LELEELNC_39 | 0.0 | 1.0 | 0.0 |
| LELEELNC_40 | 0.0 | 1.0 | 0.0 |
| LELEELNC_59 | 0.0 | 1.0 | 0.0 |
| LELEELNC_78 | 1.0 | 0.0 | 1.0 |
| LELEELNC_79 | 1.0 | 0.0 | 1.0 |
| LELEELNC_80 | 0.0 | 1.0 | 0.0 |
| LELEELNC_90 | 0.0 | 1.0 | 0.0 |
| LELEELNC_93 | 0.0 | 1.0 | 0.0 |
| LELEELNC_100 | 0.0 | 1.0 | 0.0 |
| LELEELNC_101 | 0.0 | 1.0 | 0.0 |
| LELEELNC_104 | 1.0 | 0.0 | 1.0 |
| LELEELNC_105 | 0.0 | 1.0 | 0.0 |
| LELEELNC_113 | 0.0 | 1.0 | 0.0 |
| LELEELNC_119 | 1.0 | 0.0 | 1.0 |
| LELEELNC_120 | 0.0 | 1.0 | 0.0 |
| LELEELNC_121 | 0.0 | 1.0 | 0.0 |
| LELEELNC_127 | 0.0 | 1.0 | 0.0 |
| LELEELNC_128 | 0.0 | 1.0 | 0.0 |
| LELEELNC_136 | 0.0 | 1.0 | 0.0 |
| LELEELNC_137 | 0.0 | 1.0 | 0.0 |
| LELEELNC_145 | 0.0 | 1.0 | 0.0 |
| LELEELNC_147 | 0.0 | 1.0 | 0.0 |
| LELEELNC_148 | 0.0 | 1.0 | 0.0 |
| LELEELNC_149 | 0.0 | 1.0 | 0.0 |
| LELEELNC_150 | 1.0 | 0.0 | 1.0 |
| LELEELNC_151 | 1.0 | 0.0 | 1.0 |
| LELEELNC_152 | 0.0 | 1.0 | 0.0 |
| LELEELNC_153 | 0.0 | 1.0 | 0.0 |
| LELEELNC_154 | 0.0 | 1.0 | 0.0 |
| LELEELNC_155 | 0.0 | 1.0 | 0.0 |
| LELEELNC_156 | 0.0 | 1.0 | 0.0 |
| LELEELNC_158 | 0.0 | 1.0 | 0.0 |
| LELEELNC_159 | 0.0 | 1.0 | 0.0 |
| LELEELNC_160 | 0.0 | 1.0 | 0.0 |
| LELEELNC_161 | 0.0 | 1.0 | 0.0 |
| LELEELNC_162 | 1.0 | 0.0 | 1.0 |
| LELEELNC_163 | 0.0 | 1.0 | 0.0 |
| LELEELNC_164 | 1.0 | 0.0 | 1.0 |
| LELEELNC_165 | 0.0 | 1.0 | 0.0 |
| LELEELNC_166 | 0.0 | 1.0 | 0.0 |
| LELEELNC_167 | 0.0 | 1.0 | 0.0 |
| LELEELNC_169 | 0.0 | 1.0 | 0.0 |
| LELEELNC_170 | 0.0 | 1.0 | 0.0 |
| LELEELNC_171 | 0.0 | 1.0 | 0.0 |
| LELEELNC_172 | 0.0 | 1.0 | 0.0 |
| LELEELNC_173 | 1.0 | 0.0 | 1.0 |
| LELEELNC_174 | 0.0 | 1.0 | 0.0 |
| LELEELNC_175 | 0.0 | 1.0 | 0.0 |
| LELEELNC_176 | 1.0 | 0.0 | 1.0 |
| LELEELNC_177 | 1.0 | 0.0 | 1.0 |
| LELEELNC_178 | 0.0 | 1.0 | 0.0 |
| LELEELNC_180 | 0.0 | 1.0 | 0.0 |
| LELEELNC_181 | 0.0 | 1.0 | 0.0 |
| LELEELNC_182 | 0.0 | 1.0 | 0.0 |
| LELEELNC_184 | 0.0 | 1.0 | 0.0 |
| LELEELNC_185 | 0.0 | 1.0 | 0.0 |
| LELEELNC_186 | 0.0 | 1.0 | 0.0 |
| LELEELNC_187 | 0.0 | 1.0 | 0.0 |
| LELEELNC_188 | 0.0 | 1.0 | 0.0 |
| LELEELNC_189 | 0.0 | 1.0 | 0.0 |
| LELEELNC_191 | 0.0 | 1.0 | 0.0 |
| LELEELNC_192 | 0.0 | 1.0 | 0.0 |
| LELEELNC_193 | 0.0 | 1.0 | 0.0 |
| LELEELNC_194 | 0.0 | 1.0 | 0.0 |
| LELEELNC_195 | 0.0 | 1.0 | 0.0 |
| LELEELNC_196 | 0.0 | 1.0 | 0.0 |
| LELEELNC_197 | 0.0 | 1.0 | 0.0 |
| LELEELNC_198 | 1.0 | 0.0 | 1.0 |
| LELEELNC_199 | 0.0 | 1.0 | 0.0 |
| LELEELNC_200 | 0.0 | 1.0 | 0.0 |
| LELEELNC_202 | 0.0 | 1.0 | 0.0 |
| LELEELNC_203 | 0.0 | 1.0 | 0.0 |
| LELEELNC_204 | 0.0 | 1.0 | 0.0 |
| LELEELNC_205 | 0.0 | 1.0 | 0.0 |
| LELEELNC_209 | 0.0 | 1.0 | 0.0 |
| LELEELNC_210 | 1.0 | 0.0 | 1.0 |
| LELEELNC_211 | 0.0 | 1.0 | 0.0 |
| LELEELNC_212 | 0.0 | 1.0 | 0.0 |
| LELEELNC_224 | 0.0 | 1.0 | 0.0 |
| LELEELNC_225 | 1.0 | 0.0 | 1.0 |
| LELEELNC_226 | 1.0 | 0.0 | 1.0 |
| LELEELNC_227 | 0.0 | 1.0 | 0.0 |
| LELEELNC_231 | 1.0 | 0.0 | 1.0 |
| LELEELNC_232 | 0.0 | 1.0 | 0.0 |
| LELEELNC_233 | 1.0 | 0.0 | 1.0 |
| LELEELNC_248 | 0.0 | 1.0 | 0.0 |
| LELEELNC_249 | 0.0 | 1.0 | 0.0 |
| LELEELNC_250 | 1.0 | 0.0 | 1.0 |
| LELEELNC_265 | 0.0 | 1.0 | 0.0 |
| LELEELNC_267 | 0.0 | 1.0 | 0.0 |
| LELEELNC_276 | 1.0 | 0.0 | 1.0 |
| LELEELNC_277 | 0.0 | 1.0 | 0.0 |
| LELEELNC_278 | 1.0 | 0.0 | 1.0 |
| LELEELNC_279 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LELEELNC_187 | 7898 | 13494 | False | Myoviridae | VOG0382, VOG0384, VOG10104 |
| LELEELNC_278 | 19977 | 26265 | False | Siphoviridae | VOG4799, VOG0514, VOG0226, VOG4955, VOG5692, VOG7812, VOG3478, VOG0707, VOG9469, VOG1564, VOG2124 |
Phigaro v2.4.0 (Database: Jan. 2024 release)