Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNNHBOHL_96 | 59233 | 59039 | CspA | 1.52e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DNNHBOHL_100 | 11006 | 11910 | rep38 | 917 / 1104 | 80.04 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DNNHBOHL_2 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_3 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_4 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_5 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_12 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_13 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_14 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_15 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_16 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_24 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_27 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_28 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_29 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_35 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_39 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_40 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_41 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_42 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_43 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_44 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_45 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_47 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_48 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_49 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_50 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_51 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_52 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_53 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_54 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_55 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_56 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_58 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_59 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_60 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_61 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_62 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_63 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_64 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_65 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_66 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_67 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_69 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_70 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_71 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_72 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_73 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_74 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_75 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_76 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_77 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_78 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_80 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_81 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_82 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_83 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_84 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_85 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_86 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_87 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_88 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_89 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_90 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_91 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_92 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_93 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_94 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_95 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_96 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_97 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_98 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_99 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_100 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_101 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_102 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_103 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_104 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_105 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_106 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_107 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_108 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_109 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_110 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_111 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_114 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_115 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_116 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_120 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_123 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_125 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_127 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_133 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_138 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_139 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_143 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_144 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_146 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_147 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_157 | 1.0 | 0.0 | 1.0 |
| DNNHBOHL_158 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_160 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_161 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_162 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_167 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_168 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_169 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_175 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_176 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_187 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_188 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_197 | 0.0 | 1.0 | 0.0 |
| DNNHBOHL_198 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DNNHBOHL_51 | 42637 | 70641 | False | Siphoviridae | VOG1637, VOG9998, VOG4705, VOG4334, VOG4856, VOG9997, VOG1050, VOG10972, VOG3462, VOG0801, VOG6163, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG0866 |
| DNNHBOHL_51 | 93981 | 104976 | False | Siphoviridae | VOG6214, VOG4010, VOG6495, VOG5474, VOG4693, VOG1183, VOG4566, VOG0514, VOG0226, VOG4955, VOG5692, VOG7812, VOG3478, VOG0707, VOG9469, VOG1564, VOG8520, VOG8520, VOG4602, VOG6914 |
| DNNHBOHL_73 | 2133 | 30352 | False | Siphoviridae | VOG0641, VOG0648, VOG9888, VOG10608, VOG1335, VOG6163, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG0376, VOG0796, VOG3477, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)