Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
JKILIIDO_491163511441CspA7.25e-29cold shock protein84.6198.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
JKILIIDO_20.01.00.0
JKILIIDO_90.01.00.0
JKILIIDO_130.01.00.0
JKILIIDO_150.01.00.0
JKILIIDO_161.00.01.0
JKILIIDO_171.00.01.0
JKILIIDO_180.01.00.0
JKILIIDO_190.01.00.0
JKILIIDO_210.01.00.0
JKILIIDO_220.01.00.0
JKILIIDO_230.01.00.0
JKILIIDO_250.01.00.0
JKILIIDO_260.01.00.0
JKILIIDO_270.01.00.0
JKILIIDO_280.01.00.0
JKILIIDO_291.00.01.0
JKILIIDO_300.01.00.0
JKILIIDO_310.01.00.0
JKILIIDO_321.00.01.0
JKILIIDO_331.00.01.0
JKILIIDO_340.01.00.0
JKILIIDO_360.01.00.0
JKILIIDO_371.00.01.0
JKILIIDO_380.01.00.0
JKILIIDO_390.01.00.0
JKILIIDO_400.01.00.0
JKILIIDO_410.01.00.0
JKILIIDO_420.01.00.0
JKILIIDO_430.01.00.0
JKILIIDO_440.01.00.0
JKILIIDO_450.01.00.0
JKILIIDO_471.00.01.0
JKILIIDO_480.01.00.0
JKILIIDO_490.01.00.0
JKILIIDO_500.01.00.0
JKILIIDO_510.01.00.0
JKILIIDO_520.01.00.0
JKILIIDO_530.01.00.0
JKILIIDO_540.01.00.0
JKILIIDO_550.01.00.0
JKILIIDO_580.01.00.0
JKILIIDO_590.01.00.0
JKILIIDO_600.01.00.0
JKILIIDO_610.01.00.0
JKILIIDO_620.01.00.0
JKILIIDO_631.00.01.0
JKILIIDO_640.01.00.0
JKILIIDO_650.01.00.0
JKILIIDO_660.01.00.0
JKILIIDO_670.01.00.0
JKILIIDO_681.00.01.0
JKILIIDO_690.01.00.0
JKILIIDO_700.01.00.0
JKILIIDO_710.01.00.0
JKILIIDO_720.01.00.0
JKILIIDO_730.01.00.0
JKILIIDO_740.01.00.0
JKILIIDO_750.01.00.0
JKILIIDO_760.01.00.0
JKILIIDO_770.01.00.0
JKILIIDO_780.01.00.0
JKILIIDO_800.01.00.0
JKILIIDO_810.01.00.0
JKILIIDO_820.01.00.0
JKILIIDO_830.01.00.0
JKILIIDO_840.01.00.0
JKILIIDO_850.01.00.0
JKILIIDO_860.01.00.0
JKILIIDO_870.01.00.0
JKILIIDO_880.01.00.0
JKILIIDO_950.01.00.0
JKILIIDO_960.01.00.0
JKILIIDO_1050.01.00.0
JKILIIDO_1100.01.00.0
JKILIIDO_1110.01.00.0
JKILIIDO_1120.01.00.0
JKILIIDO_1141.00.01.0
JKILIIDO_1150.01.00.0
JKILIIDO_1250.01.00.0
JKILIIDO_1330.01.00.0
JKILIIDO_1340.01.00.0
JKILIIDO_1360.01.00.0
JKILIIDO_1430.01.00.0
JKILIIDO_1610.01.00.0
JKILIIDO_1620.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
JKILIIDO_17322923792FalseSiphoviridaeVOG0641, VOG6886, VOG9657, VOG4910, VOG4633, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796
JKILIIDO_39328610409FalseSiphoviridaeVOG8520, VOG8520, VOG1564, VOG9469, VOG0707, VOG3478, VOG5692, VOG0226, VOG0514, VOG4799
JKILIIDO_393868161808FalseSiphoviridaeVOG4581, VOG5047, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0801, VOG3462, VOG5560, VOG8438, VOG4705, VOG1637
JKILIIDO_471748937245FalseSiphoviridaeVOG5317, VOG0686, VOG7111, VOG0198, VOG0195, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163
JKILIIDO_854222264832FalseSiphoviridaeVOG8294, VOG0703, VOG1637, VOG4705, VOG1927, VOG3462, VOG0801, VOG6163, VOG0817, VOG0725, VOG0704, VOG4713, VOG4711, VOG4555, VOG4564, VOG0720, VOG4544

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements