Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BJJPGECL_262 | 6142 | 5948 | CspA | 2.68e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJJPGECL_20 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_36 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_44 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_49 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_50 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_51 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_52 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_68 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_95 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_96 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_97 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_98 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_111 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_113 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_114 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_127 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_128 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_131 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_143 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_145 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_150 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_172 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_173 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_174 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_175 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_176 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_204 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_214 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_215 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_225 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_226 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_227 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_228 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_229 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_230 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_231 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_232 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_233 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_234 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_236 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_237 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_238 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_239 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_240 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_241 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_242 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_243 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_244 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_245 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_247 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_248 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_249 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_250 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_251 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_252 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_253 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_254 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_255 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_256 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_258 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_259 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_260 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_261 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_262 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_263 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_264 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_265 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_266 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_267 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_269 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_270 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_271 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_272 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_273 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_274 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_275 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_277 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_278 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_280 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_281 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_282 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_283 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_284 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_285 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_289 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_291 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_292 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_293 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_314 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_315 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_336 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_337 | 0.0 | 1.0 | 0.0 |
| BJJPGECL_353 | 1.0 | 0.0 | 1.0 |
| BJJPGECL_354 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)