Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BOPFJDCP_203 | 18447 | 18641 | CspA | 7.04e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BOPFJDCP_122 | 23025 | 23894 | repUS67 | 883 / 1039 | 88.67 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BOPFJDCP_2 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_8 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_9 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_10 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_11 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_13 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_21 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_22 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_23 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_37 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_50 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_58 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_59 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_60 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_61 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_69 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_77 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_78 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_80 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_93 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_94 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_95 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_98 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_99 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_100 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_102 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_103 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_104 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_105 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_106 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_107 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_108 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_109 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_110 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_111 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_113 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_114 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_115 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_116 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_117 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_118 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_119 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_120 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_121 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_122 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_123 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_125 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_126 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_127 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_128 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_129 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_130 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_131 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_132 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_133 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_134 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_135 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_136 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_137 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_138 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_139 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_140 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_141 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_142 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_143 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_144 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_145 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_147 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_148 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_149 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_150 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_151 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_152 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_153 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_154 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_155 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_156 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_158 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_159 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_160 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_161 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_162 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_163 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_164 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_165 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_166 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_167 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_169 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_170 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_171 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_172 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_173 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_174 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_175 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_176 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_177 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_178 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_180 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_181 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_182 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_183 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_184 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_185 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_186 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_187 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_188 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_189 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_191 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_192 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_193 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_194 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_195 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_196 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_197 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_198 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_199 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_200 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_202 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_203 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_204 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_211 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_212 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_213 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_225 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_226 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_227 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_242 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_248 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_249 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_251 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_261 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_263 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_270 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_271 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_272 | 0.0 | 1.0 | 0.0 |
| BOPFJDCP_279 | 1.0 | 0.0 | 1.0 |
| BOPFJDCP_280 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BOPFJDCP_11 | 29414 | 48775 | False | Siphoviridae | VOG5601, VOG4856, VOG3462, VOG0801, VOG6163, VOG0725, VOG0799, VOG0724, VOG1353, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227 |
| BOPFJDCP_80 | 1283 | 22697 | False | Siphoviridae | VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0822, VOG0195, VOG0198, VOG0686, VOG3307, VOG5317, VOG5280, VOG4010 |
| BOPFJDCP_122 | 11185 | 16971 | False | Unknown | VOG6036, VOG6941, VOG6246, VOG6524, VOG6031 |
| BOPFJDCP_134 | 1667 | 26820 | False | Siphoviridae | VOG4910, VOG4633, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG1414, VOG0198, VOG1183, VOG0686, VOG3307, VOG1298, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322 |
| BOPFJDCP_172 | 13720 | 26058 | False | Siphoviridae | VOG4693, VOG2388, VOG1183, VOG7293, VOG0638, VOG0686, VOG9078, VOG7910, VOG4908, VOG0514, VOG0226, VOG4955, VOG5692, VOG7812, VOG3478, VOG0707, VOG9469, VOG1564, VOG2124, VOG1638, VOG3711, VOG8520, VOG4602, VOG6914 |
| BOPFJDCP_180 | 38675 | 66613 | False | Siphoviridae | VOG0054, VOG1637, VOG9998, VOG7368, VOG4705, VOG4334, VOG4856, VOG9997, VOG3405, VOG10972, VOG3462, VOG0801, VOG4545, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG4581, VOG4841 |
Phigaro v2.4.0 (Database: Jan. 2024 release)