Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EJKOLHPG_244 | 24506 | 24700 | CspA | 2.51e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EJKOLHPG_5 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_6 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_7 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_8 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_23 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_25 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_39 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_40 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_54 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_55 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_56 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_58 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_59 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_60 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_61 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_62 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_68 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_80 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_81 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_93 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_117 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_118 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_119 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_120 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_121 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_122 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_123 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_125 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_126 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_127 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_128 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_129 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_130 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_131 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_132 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_133 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_134 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_136 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_137 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_138 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_139 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_140 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_141 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_142 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_143 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_144 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_145 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_147 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_148 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_149 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_150 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_151 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_152 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_153 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_154 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_155 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_156 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_159 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_160 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_161 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_162 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_163 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_164 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_165 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_189 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_190 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_203 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_204 | 1.0 | 0.0 | 1.0 |
| EJKOLHPG_205 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_225 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_226 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_227 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_242 | 0.0 | 1.0 | 0.0 |
| EJKOLHPG_244 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EJKOLHPG_118 | 4695 | 36249 | False | Siphoviridae | VOG3622, VOG2228, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG3307, VOG0713, VOG3307, VOG0198, VOG1888, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG4910, VOG9344, VOG8917 |
| EJKOLHPG_127 | 137209 | 142769 | False | Siphoviridae | VOG4602, VOG6495, VOG9667, VOG3461, VOG5278, VOG0535, VOG0906, VOG0514, VOG0226 |
| EJKOLHPG_160 | 17375 | 19369 | False | Siphoviridae | VOG8520, VOG5063, VOG0806, VOG4322 |
| EJKOLHPG_160 | 28079 | 40007 | False | Siphoviridae | VOG0198, VOG5747, VOG8453, VOG0376, VOG0796, VOG0720, VOG4564, VOG4555, VOG4711, VOG4713, VOG0723 |
Phigaro v2.4.0 (Database: Jan. 2024 release)