Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DDMMPAAP_151 | 25780 | 25974 | CspA | 2.57e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DDMMPAAP_17 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_42 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_56 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_58 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_95 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_96 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_121 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_122 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_123 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_125 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_126 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_127 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_128 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_129 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_130 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_131 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_132 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_133 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_134 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_136 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_137 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_138 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_139 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_140 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_141 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_142 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_143 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_144 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_145 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_147 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_148 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_149 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_150 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_151 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_152 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_153 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_154 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_155 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_156 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_158 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_159 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_160 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_161 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_162 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_163 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_164 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_165 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_166 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_167 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_169 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_170 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_171 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_172 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_173 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_174 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_175 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_176 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_177 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_178 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_180 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_181 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_182 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_183 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_184 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_185 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_186 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_187 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_188 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_189 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_191 | 1.0 | 0.0 | 1.0 |
| DDMMPAAP_192 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_193 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_194 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_211 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_222 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_223 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_224 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_237 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_253 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_254 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_263 | 0.0 | 1.0 | 0.0 |
| DDMMPAAP_264 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DDMMPAAP_173 | 2057 | 23646 | False | Siphoviridae | VOG4752, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0866, VOG0198, VOG6325, VOG7111 |
| DDMMPAAP_188 | 103203 | 110024 | False | Siphoviridae | VOG9267, VOG9667, VOG6495, VOG4481, VOG9667, VOG5278, VOG0535, VOG0283, VOG0514, VOG0226, VOG8647 |
| DDMMPAAP_192 | 26470 | 46891 | False | Siphoviridae | VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG3307, VOG0713, VOG0198, VOG8946, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725 |
Phigaro v2.4.0 (Database: Jan. 2024 release)